ggKbase home page

sw_9_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 138 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_57_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1446..1685
DNA (240bp) protein (80aa)
Plasmid partition protein ParA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H476_SALRM
parA; plasmid partition protein ParA
Plasmid partition protein ParA {ECO:0000313|EMBL:CBH22716.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_9_scaffold_57_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1797..2060
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6L4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23669.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_57_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2117..2629
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6L3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23668.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_57_4
unknown

Not on your lists

comp(2861..3316)
DNA (456bp) protein (152aa)

This feature has no annotations

sw_9_scaffold_57_5
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(3323..3940)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G292_9DELT
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
hypothetical protein
sw_9_scaffold_57_6
unknown

Not on your lists

comp(3933..4175)
DNA (243bp) protein (81aa)

This feature has no annotations

sw_9_scaffold_57_7
unknown

Not on your lists

comp(4517..4786)
DNA (270bp) protein (90aa)

This feature has no annotations

sw_9_scaffold_57_8
unknown

Not on your lists

5235..5417
DNA (183bp) protein (61aa)

This feature has no annotations

sw_9_scaffold_57_9
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5421..5843
DNA (423bp) protein (141aa)
Toxin n=1 Tax=Serratia marcescens EGD-HP20 RepID=U1VFX6_SERMA
phage/plasmid maintenance toxin/antidote system protein (toxin)
Phage/plasmid maintenance toxin/antidote system protein (Toxin) {ECO:0000313|EMBL:AGE19373.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriacea
sw_9_scaffold_57_10
unknown

Not on your lists

comp(5855..6076)
DNA (222bp) protein (74aa)

This feature has no annotations

sw_9_scaffold_57_11
unknown

Not on your lists

comp(6228..6497)
DNA (270bp) protein (90aa)

This feature has no annotations

sw_9_scaffold_57_12
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6796..7914
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037847BD
RNA-binding region RNP-1 protein {ECO:0000313|EMBL:ERJ20684.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Sali
hypothetical protein
sw_9_scaffold_57_13
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8127..8510
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037847BD
Uncharacterized protein {ECO:0000313|EMBL:AHM60268.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
DNA methyltransferase
sw_9_scaffold_57_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8480..8671
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H507_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23112.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_57_15
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8829..9245)
DNA (417bp) protein (139aa)
twitching motility protein PilT; K07063 Tax=RBG_13_Nitrospirae_41_22_curated
Nucleotide binding protein PINc id=3683608 bin=GWF2_Syntrophobacterales_56_9 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
sw_9_scaffold_57_16
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9242..9517)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SK96_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFI36299.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desul
sw_9_scaffold_57_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9818..10453)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4G3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22803.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_57_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10465..10959)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4G3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22803.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_57_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11464..11835)
DNA (372bp) protein (124aa)
dinP; DNA polymerase IV, damage-inducible protein P (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000313|EMBL:CBH22754.1};; TaxID=761659 species="
DNA polymerase IV n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4B4_SALRM
sw_9_scaffold_57_20
unknown

Not on your lists

11920..12126
DNA (207bp) protein (69aa)

This feature has no annotations

sw_9_scaffold_57_21
unknown

Not on your lists

comp(12750..12905)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_9_scaffold_57_22
unknown

Not on your lists

13192..13317
DNA (126bp) protein (42aa)

This feature has no annotations

sw_9_scaffold_57_23
unknown

Not on your lists

13434..14411
DNA (978bp) protein (326aa)

This feature has no annotations

sw_9_scaffold_57_24
unknown

Not on your lists

14490..15077
DNA (588bp) protein (196aa)

This feature has no annotations

sw_9_scaffold_57_25
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

15347..15712
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ78173.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
transposase IS204/IS1001/IS1096/IS1165 family protein
sw_9_scaffold_57_26
unknown

Not on your lists

15760..15942
DNA (183bp) protein (61aa)

This feature has no annotations

sw_9_scaffold_57_27

Not on your lists

15959..17068
DNA (1110bp) protein (370aa)
Transposase IS4 family protein n=1 Tax=mine drainage metagenome RepID=T1CVK7_9ZZZZ
Transposase IS4 family protein {ECO:0000313|EMBL:EQD74010.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase, IS4 family
sw_9_scaffold_57_28
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17082..17606
DNA (525bp) protein (175aa)
Transposase IS4 family protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4R0B8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJB90465.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
transposase IS4 family protein
sw_9_scaffold_57_29
unknown

Not on your lists

18228..18446
DNA (219bp) protein (73aa)

This feature has no annotations

sw_9_scaffold_57_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18449..18958
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5T3_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43613.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 138 in total

View Taxonomy