ggKbase home page

sw_9_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 75 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_58_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..1481)
DNA (1479bp) protein (493aa)
gcvT3; sacrosine dehydrogenase/glycine cleavage T-protein (EC:2.1.2.10 1.5.3.1)
Sacrosine dehydrogenase/glycine cleavage T protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KA93_9EURY
Sacrosine dehydrogenase/glycine cleavage T protein {ECO:0000313|EMBL:EMA18312.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
sw_9_scaffold_58_2
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1678..2064)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U4Z8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27506.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_9_scaffold_58_3
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2136..3083
DNA (948bp) protein (316aa)
Serine protease n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V5Z5_HALMA
htrA2; serine protease
Serine protease {ECO:0000313|EMBL:AAV45057.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC
sw_9_scaffold_58_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3189..4193
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JNZ6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27494.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_9_scaffold_58_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4266..5120
DNA (855bp) protein (285aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
5,10-methylenetetrahydrofolate reductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L2L1_HALJP
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:EMA27776.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_9_scaffold_58_6
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5229..6605
DNA (1377bp) protein (459aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMQ2_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA10427.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
livH3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_9_scaffold_58_7
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6605..8368
DNA (1764bp) protein (588aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JPW8_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA10428.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
livM3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_9_scaffold_58_8
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8365..9333
DNA (969bp) protein (323aa)
ABC-type branched-chain amino acid transport system, ATP-binding protein II n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JR11_9EURY
ABC-type branched-chain amino acid transport system, ATP-binding protein II {ECO:0000313|EMBL:EMA10429.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
sw_9_scaffold_58_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9335..10042
DNA (708bp) protein (236aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JRZ3_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA10430.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livF3; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_9_scaffold_58_10
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10072..11274)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JN36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA10431.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_9_scaffold_58_11
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11350..12651)
DNA (1302bp) protein (434aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=2 Tax=Haloarcula RepID=M0JMQ8_9EURY
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA10432.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloar
livJ; ABC-type branched-chain amino acid transport systems, substrate-binding protein
sw_9_scaffold_58_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12810..14057
DNA (1248bp) protein (416aa)
glyA; serine/glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=2 Tax=Haloarcula hispanica RepID=G0HSK8_HALHT
sw_9_scaffold_58_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14064..14654)
DNA (591bp) protein (197aa)
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MER4_HALMO
Formimidoyltetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:EMA42900.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
formiminotransferase-cyclodeaminase
sw_9_scaffold_58_14
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14715..15956)
DNA (1242bp) protein (414aa)
gcvT5; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JM92_HALVA
Aminomethyltransferase {ECO:0000313|EMBL:EMA08805.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
sw_9_scaffold_58_15
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16207..16497
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DMQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36083.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
sw_9_scaffold_58_16
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17004..17852)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12169.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_9_scaffold_58_17
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17849..18247)
DNA (399bp) protein (133aa)
6-pyruvoyltetrahydropterin synthase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH8_HALUD
6-pyruvoyltetrahydropterin synthase
6-pyruvoyltetrahydropterin synthase {ECO:0000313|EMBL:ACV12168.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus uta
sw_9_scaffold_58_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18244..19254)
DNA (1011bp) protein (337aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH7_HALUD
Alcohol dehydrogenase zinc-binding domain protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACV12167.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="H
sw_9_scaffold_58_19
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19254..20033)
DNA (780bp) protein (260aa)
GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
GTP cyclohydrolase III n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH6_HALUD
sw_9_scaffold_58_20
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20097..20660)
DNA (564bp) protein (188aa)
Phosphoesterase PA-phosphatase related n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH5_HALUD
phosphoesterase PA-phosphatase related
Phosphoesterase PA-phosphatase related {ECO:0000313|EMBL:ACV12165.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
sw_9_scaffold_58_21
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20695..21174)
DNA (480bp) protein (160aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J6J8_HALVA
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA04581.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Ha
membrane-bound metal-dependent hydrolase
sw_9_scaffold_58_22
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21200..21892)
DNA (693bp) protein (231aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH3_HALUD
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ACV12163.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus uta
sw_9_scaffold_58_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22022..22411)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA4_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35539.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_58_24
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22481..24457)
DNA (1977bp) protein (659aa)
Aldo/keto reductase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LT56_HALLT
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACM56121.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATC
sw_9_scaffold_58_25
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24560..25435
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH0_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12160.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_9_scaffold_58_26
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25573..26676
DNA (1104bp) protein (368aa)
Glycosyl transferase group 1 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTG9_HALUD
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACV12159.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_9_scaffold_58_27
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26840..27499)
DNA (660bp) protein (220aa)
Putative transcriptional regulator n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JI46_HALVA
Putative transcriptional regulator {ECO:0000313|EMBL:EMA08802.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallis
XRE family transcriptional regulator
sw_9_scaffold_58_28
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27769..28233)
DNA (465bp) protein (155aa)
Chromosome segregation ATPase-like protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S294_HALTV
Chromosome segregation ATPase-like protein
Chromosome segregation ATPase-like protein {ECO:0000313|EMBL:ADB63491.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
sw_9_scaffold_58_29
unknown

Not on your lists

28409..28567
DNA (159bp) protein (53aa)

This feature has no annotations

sw_9_scaffold_58_30
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29259..30200)
DNA (942bp) protein (314aa)
Uncharacterized protein {ECO:0000313|EMBL:KDE57492.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
Putative TIM-barrel fold metal-dependent hydrolase id=2136391 bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ligW2; 5-carboxyvanillate decarboxylase
Displaying items 1-30 of 75 in total

View Taxonomy