ggKbase home page

sw_9_scaffold_587

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_587_1
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..211)
DNA (210bp) protein (70aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Archaeosine biosynthesis pro
7-carboxy-7-deazaguanine synthase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P9C4_9EURY
Radical SAM domain protein
sw_9_scaffold_587_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

255..560
DNA (306bp) protein (102aa)
UPF0272 protein C469_00811 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P3N5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39395.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_9_scaffold_587_3

Not on your lists

comp(608..1030)
DNA (423bp) protein (141aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XGE2_9ARCH
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ESS07194.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
universal stress protein UspA
sw_9_scaffold_587_4

Not on your lists

comp(1038..1685)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XY49_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07193.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_9_scaffold_587_trna_1
unknown

Not on your lists

comp(1930..1999)
DNA (70bp)
transferRNA
sw_9_scaffold_587_5
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2398..2511
DNA (114bp) protein (38aa)
ABC transporter ATP-binding protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003680C05
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ40684.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
sw_9_scaffold_587_6

Not on your lists

comp(2747..3499)
DNA (753bp) protein (251aa)
dehydrogenase (EC:1.-.-.-) rbh
Short-chain dehydrogenase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZJ95_9ARCH
Short-chain dehydrogenase {ECO:0000313|EMBL:ESS02345.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_9_scaffold_587_7
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3509..3775)
DNA (267bp) protein (89aa)
Protein kinase {ECO:0000313|EMBL:ELZ45652.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
sw_9_scaffold_587_8
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3897..4184
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E7T7_9EURY
AbrB family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ELZ43053.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
sw_9_scaffold_587_9
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4154..4567
DNA (414bp) protein (138aa)
Transcription regulator n=2 Tax=Haloarcula RepID=Q5V389_HALMA
transcription regulator
Transcription regulator {ECO:0000313|EMBL:AAV46013.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_9_scaffold_587_10
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4560..5027
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FA49_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ56213.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_587_11
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5149..6282
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NGC0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA57002.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_9_scaffold_587_12
unknown

Not on your lists

comp(7043..7552)
DNA (510bp) protein (170aa)

This feature has no annotations

sw_9_scaffold_587_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7808..8431
DNA (624bp) protein (208aa)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXM5_9EURY
Peptide methionine sulfoxide reductase MsrA {ECO:0000313|EMBL:ELZ39472.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
msrA; peptide methionine sulfoxide reductase (S-form specific)
sw_9_scaffold_587_14
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8481..8699
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000362694E
Uncharacterized protein {ECO:0000313|EMBL:ELZ46992.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_9_scaffold_587_15
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8696..9625)
DNA (930bp) protein (310aa)
Oxidoreductase {ECO:0000313|EMBL:CDK37808.1}; EC=1.1.1.184 {ECO:0000313|EMBL:CDK37808.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
Oxidoreductase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DRH6_9EURY
fabG; oxidoreductase
sw_9_scaffold_587_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9784..10107
DNA (324bp) protein (108aa)
AbrB family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0L7_NATM8
AbrB family transcription regulator
Probable VapB/AbrB family antitoxin {ECO:0000313|EMBL:CCQ36003.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
Displaying 17 items

View Taxonomy