ggKbase home page

sw_9_scaffold_802

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_802_1
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..144
DNA (144bp) protein (48aa)
Uncharacterized protein n=6 Tax=Halorubrum RepID=M0DIE4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64528.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
sw_9_scaffold_802_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(402..1514)
DNA (1113bp) protein (371aa)
Aldo/keto reductase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DLD8_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ35502.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210
aldo/keto reductase
sw_9_scaffold_802_3
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1741..2016
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PBL8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66225.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_9_scaffold_802_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2013..2399
DNA (387bp) protein (129aa)
PilT protein domain-containing protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P9H9_9EURY
PilT protein domain-containing protein {ECO:0000313|EMBL:EMA66224.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocur
PilT protein domain-containing protein
sw_9_scaffold_802_5
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2650..3459
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJ52_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35501.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_802_6
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3463..4251
DNA (789bp) protein (263aa)
Mechanosensitive ion channel n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EGL8_9EURY
Mechanosensitive ion channel {ECO:0000313|EMBL:ELZ46012.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10
mechanosensitive ion channel
sw_9_scaffold_802_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4325..5545
DNA (1221bp) protein (407aa)
Pas domain s-box n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FNG0_9EURY
Pas domain s-box {ECO:0000313|EMBL:ELZ61556.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
pas domain s-box
sw_9_scaffold_802_8
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5633..5788
DNA (156bp) protein (52aa)
GCN5-related N-acetyltransferase n=2 Tax=Halorubrum distributum RepID=M0EYG7_9EURY
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EMA64536.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JC
sw_9_scaffold_802_9
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5956..8217
DNA (2262bp) protein (754aa)
DEAD/DEAH box helicase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQL1_9EURY
DEAD/DEAH box helicase {ECO:0000313|EMBL:ELZ61558.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7008
DEAD/DEAH box helicase
sw_9_scaffold_802_10
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8463..9980
DNA (1518bp) protein (506aa)
DNA photolyase FAD-binding (EC:4.1.99.3) rbh
Deoxyribodipyrimidine photolyase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FSM5_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ELZ61559.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium
sw_9_scaffold_802_11
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10014..10376)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DRJ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK38786.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_9_scaffold_802_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10433..11431)
DNA (999bp) protein (333aa)
Diphosphomevalonate decarboxylase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FNG4_9EURY
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:ELZ61561.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochsteniu
GHMP kinase rbh
sw_9_scaffold_802_13
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11783..15709
DNA (3927bp) protein (1309aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E5T3_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ42277.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
oye3; light- and oxygen-sensing transcription regulator
sw_9_scaffold_802_14
unknown

Not on your lists

15838..16062
DNA (225bp) protein (75aa)

This feature has no annotations

sw_9_scaffold_802_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16086..16427
DNA (342bp) protein (114aa)
Ferredoxin n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FSM9_9EURY
Ferredoxin {ECO:0000313|EMBL:ELZ61564.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
ferredoxin
sw_9_scaffold_802_16
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16464..17366)
DNA (903bp) protein (301aa)
Short chain fatty acids transporter n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EAC4_9EURY
Short chain fatty acids transporter {ECO:0000313|EMBL:ELZ44710.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
atoE; short chain fatty acids transporter
Displaying 16 items

View Taxonomy