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sw_9_scaffold_932

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_932_1
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..443
DNA (441bp) protein (147aa)
transcription initiation factor TFB
Transcription factor TFIIB cyclin-related; K03124 transcription initiation factor TFIIB id=24653453 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Transcription initiation factor IIB 3 {ECO:0000313|EMBL:KKF39370.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharov
sw_9_scaffold_932_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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519..1808
DNA (1290bp) protein (430aa)
WD40-like protein repeat-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUZ9_9EURY
WD40-like protein repeat-like protein {ECO:0000313|EMBL:EFW91517.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
Pyrrolo-quinoline quinone
sw_9_scaffold_932_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2127..2348
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNQ4_NATM8
hypothetical protein
DUF650/DUF651 domain protein {ECO:0000313|EMBL:CCQ35562.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapen
sw_9_scaffold_932_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2417..3316
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMH6_NATPD
hypothetical protein
DUF650/DUF651 domain protein {ECO:0000313|EMBL:CAI50682.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_9_scaffold_932_5
unknown

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3342..3491
DNA (150bp) protein (50aa)

This feature has no annotations

sw_9_scaffold_932_6

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comp(3784..4410)
DNA (627bp) protein (209aa)
Peptide methionine sulfoxide reductase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XYL6_9ARCH
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:ESS07418.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
msrA; peptide methionine sulfoxide reductase (S-form specific)
sw_9_scaffold_932_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4481..4918)
DNA (438bp) protein (146aa)
DUF302 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYR5_NATM8
DUF302 family protein
DUF302 family protein {ECO:0000313|EMBL:CCQ35268.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_9_scaffold_932_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4979..5275)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMH9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50679.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_9_scaffold_932_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5362..5838
DNA (477bp) protein (159aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NUI5_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA61228.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum koc
membrane-bound metal-dependent hydrolase
sw_9_scaffold_932_10
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5930..6574
DNA (645bp) protein (215aa)
PAS sensor protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E6Z6_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELZ42818.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
hypothetical protein
sw_9_scaffold_932_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6794..7243
DNA (450bp) protein (150aa)
receiver/sensor box histidine kinase (EC:2.7.13.3)
HTR-like protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JPH6_9EURY
HTR-like protein {ECO:0000313|EMBL:EMA09575.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;
sw_9_scaffold_932_12
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7354..7809
DNA (456bp) protein (152aa)
Histidine kinase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RRQ3_HALTV
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ADB62520.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATCC
sw_9_scaffold_932_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7856..9409
DNA (1554bp) protein (518aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000255|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00304}; Shor
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RUBPS_NATPD
thi1; ribulose-1,5-biphosphate synthetase
sw_9_scaffold_932_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9546..10418
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NNU2_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ67556.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
sw_9_scaffold_932_15
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10379..10675
DNA (297bp) protein (99aa)
Tat (Twin-arginine translocation) pathway signal sequence domain-containing protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JGJ3_9EURY
Tat (Twin-arginine translocation) pathway signal sequence domain-containing protein {ECO:0000313|EMBL:ELZ98605.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferaca
Tat (twin-arginine translocation) pathway signal sequence domain-containing protein
Displaying 15 items

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