ggKbase home page

sw_9_scaffold_190

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_190_1
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

302..3319
DNA (3018bp) protein (1006aa)
Exonuclease SbcC n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTA6_DACSA
Exonuclease SbcC {ECO:0000313|EMBL:AFZ49707.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.;"
exonuclease SbcC
sw_9_scaffold_190_2
unknown

Not on your lists

comp(3380..3742)
DNA (363bp) protein (121aa)

This feature has no annotations

sw_9_scaffold_190_3
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4040..4522
DNA (483bp) protein (161aa)
Hydrogenase maturation protease n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBT9_HALP7
hydrogenase maturation protease
Hydrogenase maturation protease {ECO:0000313|EMBL:AFZ44314.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
sw_9_scaffold_190_4
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4582..5346)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBD9_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44271.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_9_scaffold_190_5
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5343..6116)
DNA (774bp) protein (258aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBP5_HALP7
sw_9_scaffold_190_6
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6291..7505
DNA (1215bp) protein (405aa)
Transposase, IS605 OrfB family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YH36_HALP7
transposase, IS605 OrfB family rbh
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AFZ45680.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
sw_9_scaffold_190_7
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7645..8553
DNA (909bp) protein (303aa)
Metallophosphoesterase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDW8_HALP7
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:AFZ44268.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Hal
sw_9_scaffold_190_8
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8572..10332
DNA (1761bp) protein (587aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTQ3_DACSA
dipeptide ABC transporter substrate-binding protein rbh
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:AFZ50264.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylo
sw_9_scaffold_190_9
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10372..11169
DNA (798bp) protein (266aa)
NCAIR mutase-like protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YVZ4_DACSA
NCAIR mutase-like protein rbh
NCAIR mutase-like protein {ECO:0000313|EMBL:AFZ50263.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 830
sw_9_scaffold_190_trna_1
unknown

Not on your lists

11224..11312
DNA (89bp)
transferRNA
sw_9_scaffold_190_10
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11332..11499)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YUK3_DACSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ49778.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
sw_9_scaffold_190_11
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11595..12347
DNA (753bp) protein (251aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cl
Serine acetyltransferase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBP1_HALP7
sw_9_scaffold_190_12
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12373..12891)
DNA (519bp) protein (173aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDW6_HALP7
sw_9_scaffold_190_13
Drosophila pseudoobscura, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(13007..14353)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3ICD8_STRPU
GA11808 {ECO:0000313|EMBL:EAL25702.2}; TaxID=46245 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroi
TonB family protein
sw_9_scaffold_190_14
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

14751..15224
DNA (474bp) protein (158aa)
type 11 methyltransferase Tax=GWC2_Nitrospirae_56_14_curated
Methyltransferase type 11 id=4824970 bin=GWC2_Nitrospirae-rel_56_14 species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
sw_9_scaffold_190_15
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15357..15488
DNA (132bp) protein (44aa)
SAM-dependent methyltransferase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NDR8_9BURK
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AGX88348.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mo
sw_9_scaffold_190_16
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15573..16208
DNA (636bp) protein (212aa)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YWV4_DACSA
phosphoribosyl-ATP pyrophosphohydrolase
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales;
sw_9_scaffold_190_17
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16299..16694
DNA (396bp) protein (132aa)
Response regulator receiver protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YGM2_HALP7
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AFZ45213.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece
sw_9_scaffold_190_18
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16706..16888)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YPX9_DACSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ48986.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
sw_9_scaffold_190_19
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16990..17532
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YR82_DACSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ48987.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcops
sw_9_scaffold_190_20
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17701..18918
DNA (1218bp) protein (406aa)
Geranylgeranyl reductase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YE47_HALP7
geranylgeranyl reductase rbh
Geranylgeranyl reductase {ECO:0000313|EMBL:AFZ45216.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="H
sw_9_scaffold_190_21
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19065..19832
DNA (768bp) protein (256aa)
Protein GrpE n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YR89_DACSA
molecular chaperone GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; C
sw_9_scaffold_190_22
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19941..22115
DNA (2175bp) protein (725aa)
Chaperone protein DnaK n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YGM4_HALP7
chaperone protein DnaK rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
sw_9_scaffold_190_23
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22219..23358
DNA (1140bp) protein (380aa)
Chaperone protein DnaJ n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YQ28_DACSA
chaperone protein DnaJ rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 83
sw_9_scaffold_190_24
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23355..23624
DNA (270bp) protein (90aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YRK5_DACSA
redox protein, regulator of disulfide bond formation
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:AFZ48995.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" sou
sw_9_scaffold_190_25
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23624..24676
DNA (1053bp) protein (351aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococ
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YHJ0_HALP7
ribosome small subunit-dependent GTPase A rbh
sw_9_scaffold_190_26
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24730..25512
DNA (783bp) protein (261aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AFZ42612.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AFZ42612.1};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcale
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y7Y3_HALP7
sw_9_scaffold_190_27
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25578..27287
DNA (1710bp) protein (570aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YSX2_DACSA
2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit B rbh
sw_9_scaffold_190_28
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(27277..29553)
DNA (2277bp) protein (759aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YRU8_DACSA
phosphoribosylformylglycinamidine synthase II rbh
sw_9_scaffold_190_29
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

29749..31179
DNA (1431bp) protein (477aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTK7_DACSA
deoxyribodipyrimidine photolyase rbh
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AFZ50214.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina
Displaying 30 items

View Taxonomy