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sw_9_scaffold_2090

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_2090_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..543
DNA (543bp) protein (181aa)
SAM-dependent methyltransferases n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9E0_SALRM
smtA; SAM-dependent methyltransferase
SAM-dependent methyltransferases {ECO:0000313|EMBL:CBH24645.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_9_scaffold_2090_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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686..1447
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9D9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24644.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2090_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1550..2782
DNA (1233bp) protein (411aa)
OsmC-like protein
OsmC-like protein; K06889; K07397 putative redox protein id=24659474 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
OsmC-like protein {ECO:0000313|EMBL:ABC44734.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
sw_9_scaffold_2090_trna_1
unknown

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2916..2989
DNA (74bp)
transferRNA
sw_9_scaffold_2090_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3135..3866
DNA (732bp) protein (244aa)
hypothetical protein
hypothetical protein id=24659473 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24642.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2090_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3811..4257
DNA (447bp) protein (149aa)
hypothetical protein
hypothetical protein id=24659473 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24642.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2090_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4422..7064
DNA (2643bp) protein (881aa)
Uncharacterized domain HDIG protein {ECO:0000313|EMBL:ABC43615.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
hypothetical protein; K07037 id=24659472 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
sw_9_scaffold_2090_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7078..7575)
DNA (498bp) protein (166aa)
GntR family transcriptional regulatory protein {ECO:0000313|EMBL:CBH24640.1}; EC=2.6.1.- {ECO:0000313|EMBL:CBH24640.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
GntR family transcriptional regulator
GntR family transcriptional regulator id=24659471 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_9_scaffold_2090_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7608..7919)
DNA (312bp) protein (104aa)
GntR family transcriptional regulatory protein {ECO:0000313|EMBL:CBH24640.1}; EC=2.6.1.- {ECO:0000313|EMBL:CBH24640.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
GntR family transcriptional regulator
GntR family transcriptional regulator id=24659471 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_9_scaffold_2090_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8029..8508)
DNA (480bp) protein (160aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24639.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24659470 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_9_scaffold_2090_10
unknown

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comp(8510..8602)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_9_scaffold_2090_11

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comp(8699..9097)
DNA (399bp) protein (133aa)
membrane protein n=1 Tax=Aquimarina agarilytica RepID=UPI00028834F5
Uncharacterized protein {ECO:0000313|EMBL:KKN70164.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
sw_9_scaffold_2090_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9501..11192)
DNA (1692bp) protein (564aa)
pruA; 1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] id=24659469 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ABC44349.1}; EC=1.2.1.88 {ECO:0000313|EMBL:ABC44349.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
pruA; 1-pyrroline-5-carboxylate dehydrogenase
sw_9_scaffold_2090_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11410..12639
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9D2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24637.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2090_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12699..12977
DNA (279bp) protein (93aa)
bcp; peroxiredoxin
anti-oxidant AhpCTSA family protein id=24659467 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:ABC46301.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_9_scaffold_2090_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12979..13122
DNA (144bp) protein (48aa)
bcp; peroxiredoxin
anti-oxidant AhpCTSA family protein id=24659467 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peroxiredoxin {ECO:0000313|EMBL:CBH24636.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
sw_9_scaffold_2090_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13350..14240
DNA (891bp) protein (297aa)
carbon-nitrogen family hydrolase
carbon-nitrogen family hydrolase id=24659466 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hyhydrolase, carbon-nitrogen family {ECO:0000313|EMBL:CBH24635.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_9_scaffold_2090_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14237..15211)
DNA (975bp) protein (325aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C9_SALRM
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase
sw_9_scaffold_2090_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15311..16345)
DNA (1035bp) protein (345aa)
HTH-type transcriptional regulator celR
HTH-type transcriptional regulator celR; K02529 LacI family transcriptional regulator id=24659464 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HTH-type transcriptional regulator celR {ECO:0000313|EMBL:ABC45871.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
Displaying 19 items

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