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sw_9_scaffold_298

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_298_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..120
DNA (120bp) protein (40aa)
nodB; chitooligosaccharide deacetylase
nodB; chitooligosaccharide deacetylase id=24659823 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Chitooligosaccharide deacetylase {ECO:0000313|EMBL:CBH24994.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_9_scaffold_298_2
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

228..449
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3CD71
sw_9_scaffold_298_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(400..732)
DNA (333bp) protein (111aa)
transcription regulator protein
transcriptional regulator id=24659825 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative transcriptional regulator {ECO:0000313|EMBL:CBH24996.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_9_scaffold_298_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(902..3811)
DNA (2910bp) protein (970aa)
sbcC; exonuclease SbcC
sbcC; exonuclease SbcC; K03546 exonuclease SbcC id=24659826 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Exonuclease SbcC {ECO:0000313|EMBL:CBH24997.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
sw_9_scaffold_298_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3912..4343)
DNA (432bp) protein (144aa)
hypothetical protein
hypothetical protein id=24659827 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24998.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_298_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4467..5048)
DNA (582bp) protein (194aa)
cvpA; hypothetical protein
cvpA; hypothetical protein; K03558 membrane protein required for colicin V production id=24659828 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24999.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_298_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5229..5699)
DNA (471bp) protein (157aa)
hypothetical protein
hypothetical protein; K09117 hypothetical protein id=24659829 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25000.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_298_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5955..7766)
DNA (1812bp) protein (604aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732, ECO:0000313|EMBL:CBH25001.1}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732, ECO:0000313|EMBL:CBH25001.1};; Phosphotransferas
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAE6_SALRM
ptsI; phosphoenolpyruvate-protein phosphotransferase
sw_9_scaffold_298_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7934..8203)
DNA (270bp) protein (90aa)
HPr-like protein crh n=2 Tax=Salinibacter ruber RepID=D5HAE7_SALRM
HPr-like protein crh
HPr-like protein crh {ECO:0000313|EMBL:CBH25002.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
sw_9_scaffold_298_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8312..9310)
DNA (999bp) protein (333aa)
idsA; polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] id=24659832 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
idsA; polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:ABC46321.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_9_scaffold_298_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9364..10008)
DNA (645bp) protein (215aa)
adk; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] id=24659833 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adk; adenylate kinase
sw_9_scaffold_298_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10058..10579)
DNA (522bp) protein (174aa)
hypothetical protein
hypothetical protein id=24659834 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25005.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_298_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10631..11143)
DNA (513bp) protein (171aa)
hypothetical protein
hypothetical protein id=24659835 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25006.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_298_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11345..11617
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HAF2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25007.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_298_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11621..12526)
DNA (906bp) protein (302aa)
hypothetical protein
hypothetical protein id=24659837 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25008.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_298_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12861..14249
DNA (1389bp) protein (463aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:ABC45962.1}; EC=1.17.1.2 {ECO:0000313|EMBL:ABC45962.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Salinibacter ruber RepID=D5HAF4_SALRM
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
sw_9_scaffold_298_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14240..14902
DNA (663bp) protein (221aa)
methyltransferase
Methyltransferase, putative {ECO:0000313|EMBL:CBH25010.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
methyltransferase id=24659839 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_9_scaffold_298_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15259..16629
DNA (1371bp) protein (457aa)
argE; succinyl-diaminopimelate desuccinylase
argE; succinyl-diaminopimelate desuccinylase id=24659840 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidase, M20/M25/M40 family {ECO:0000313|EMBL:ABC46222.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_9_scaffold_298_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

16676..17569
DNA (894bp) protein (298aa)
protein of unknown function DUF1080 Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein id=12554918 bin=CNBR_ACIDO species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
sw_9_scaffold_298_trna_1
unknown

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17829..17913
DNA (85bp)
transferRNA
sw_9_scaffold_298_20
unknown

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comp(17963..18178)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_9_scaffold_298_21
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(18178..18474)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4F1DF
DNA polymerase subunit beta
DNA polymerase, beta domain protein region {ECO:0000313|EMBL:ABQ90906.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sour
Displaying 22 items

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