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sw_9_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 75 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_10_1
unknown

Not on your lists

1..87
DNA (87bp) protein (29aa)

This feature has no annotations

sw_9_scaffold_10_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

736..2622
DNA (1887bp) protein (629aa)
Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:CBH23911.1}; EC=2.3.1.61 {ECO:0000313|EMBL:CBH23911.1};; TaxID=761659 species="Bacteria; Bacteroidetes;
Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7A6_SALRM
sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase
sw_9_scaffold_10_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3059..4006
DNA (948bp) protein (316aa)
Tyrosine recombinase xerD n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H797_SALRM
xerD; tyrosine recombinase XerD
Tyrosine recombinase xerD {ECO:0000313|EMBL:CBH23902.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_9_scaffold_10_4
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4070..4903)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000375FCD9
Bacteriophage protein gp37 {ECO:0000313|EMBL:EHR48731.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina X
bacteriophage protein gp37
sw_9_scaffold_10_5
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4921..5493)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037847BD
Uncharacterized protein {ECO:0000313|EMBL:AHM60268.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
hypothetical protein
sw_9_scaffold_10_6
Thermosynechococcus elongatus, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6212..8095
DNA (1884bp) protein (628aa)
Two-component hybrid sensor and regulator n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DJE3_THEEB
two-component hybrid sensor and regulator
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAC08834.1}; TaxID=197221 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynec
sw_9_scaffold_10_7
unknown

Not on your lists

8397..8669
DNA (273bp) protein (91aa)

This feature has no annotations

sw_9_scaffold_10_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8965..12441
DNA (3477bp) protein (1159aa)
Protein translocase subunit SecA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H795_SALRM
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_9_scaffold_10_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12584..14326
DNA (1743bp) protein (581aa)
recN; DNA repair protein RecN
recN; DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) id=24657672 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
sw_9_scaffold_10_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14436..15800)
DNA (1365bp) protein (455aa)
Acetylornithine aminotransferase {ECO:0000313|EMBL:CBH23898.1}; EC=2.6.1.11 {ECO:0000313|EMBL:CBH23898.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Acetylornithine aminotransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H793_SALRM
argD; Acetylornithine aminotransferase
sw_9_scaffold_10_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15863..16432)
DNA (570bp) protein (190aa)
hypothetical protein
hypothetical protein id=24658745 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43910.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_10_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16692..17231
DNA (540bp) protein (180aa)
hypothetical protein
hypothetical protein id=24658746 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25935.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_10_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17226..17684)
DNA (459bp) protein (153aa)
Acetyltransferase, GNAT family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD32_SALRM
GNAT family acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:CBH25937.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_9_scaffold_10_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17773..18441)
DNA (669bp) protein (223aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYT9_SALRD
nfi; endonuclease V
sw_9_scaffold_10_trna_1
unknown

Not on your lists

18814..18887
DNA (74bp)
transferRNA
sw_9_scaffold_10_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18988..20964
DNA (1977bp) protein (659aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD34_SALRM
thrS; threonyl-tRNA synthetase, class IIa
sw_9_scaffold_10_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21031..21666
DNA (636bp) protein (212aa)
Translation initiation factor IF-3 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD35_SALRM
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
sw_9_scaffold_10_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


21840..22037
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=RL35_SALRD
hypothetical protein
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_9_scaffold_10_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


22167..22514
DNA (348bp) protein (116aa)
50S ribosomal protein L20 n=2 Tax=Salinibacter ruber RepID=RL20_SALRD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_9_scaffold_10_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


22910..23926
DNA (1017bp) protein (339aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD39_SALRM
pheS; phenylalanyl-tRNA synthetase subunit alpha
sw_9_scaffold_10_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24811..27303
DNA (2493bp) protein (831aa)
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=24658755 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00283};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283};
pheT; phenylalanyl-tRNA synthetase subunit beta
sw_9_scaffold_10_21
unknown

Not on your lists

27314..28165
DNA (852bp) protein (284aa)

This feature has no annotations

sw_9_scaffold_10_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28583..28999
DNA (417bp) protein (139aa)
dopamine receptor D4
dopamine receptor D4 id=24658756 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dopamine receptor D4 {ECO:0000313|EMBL:ABC46345.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
sw_9_scaffold_10_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29039..29344
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD42_SALRM
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_9_scaffold_10_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29487..31499
DNA (2013bp) protein (671aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD43_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH25948.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_9_scaffold_10_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32218..32631
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5P0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23345.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_10_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32877..37928)
DNA (5052bp) protein (1684aa)
nrdB; ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=24657145 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:CBH23298.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH23298.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
nrdB; ribonucleoside-diphosphate reductase
sw_9_scaffold_10_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(38337..38783)
DNA (447bp) protein (149aa)
hypothetical protein
hypothetical protein id=24658813 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH26001.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_10_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(39112..40548)
DNA (1437bp) protein (479aa)
UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:CBH23639.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CBH23639.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
UDP-N-acetyl-D-glucosamine dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B7070C
tuaD; UDP-glucose/GDP-mannose dehydrogenase
sw_9_scaffold_10_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(40603..42477)
DNA (1875bp) protein (625aa)
glycosyl transferase n=1 Tax=Salisaeta longa RepID=UPI0003B74A7C
glycosyltransferase
Probable glycosyltransferase {ECO:0000313|EMBL:ABC44638.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
Displaying items 1-30 of 75 in total

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