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sw_9_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 188 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_17_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..400)
DNA (399bp) protein (133aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAK1_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH25056.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
sw_9_scaffold_17_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

728..1162
DNA (435bp) protein (145aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF59_RHOM4
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACY49315.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus
sw_9_scaffold_17_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1169..2503)
DNA (1335bp) protein (445aa)
lysP; amino acid permease
lysP; amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family id=24658255 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Amino acid permease family protein {ECO:0000313|EMBL:CBH25459.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_9_scaffold_17_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2936..4261
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE47_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40774.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
sw_9_scaffold_17_5
unknown

Not on your lists

comp(4322..4507)
DNA (186bp) protein (62aa)

This feature has no annotations

sw_9_scaffold_17_6
Perkinsus marinus, Perkinsus, Perkinsida, Eukaryota

Not on your lists

4941..5387
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) RepID=C5LTB3_PERM5
Putative uncharacterized protein {ECO:0000313|EMBL:EER00081.1}; TaxID=423536 species="Eukaryota; Alveolata; Perkinsea; Perkinsida; Perkinsidae; Perkinsus.;" source="Perkinsus marinus (strain ATCC 5098
hypothetical protein
sw_9_scaffold_17_7
unknown

Not on your lists

5430..6134
DNA (705bp) protein (235aa)

This feature has no annotations

sw_9_scaffold_17_8
unknown

Not on your lists

comp(8100..8807)
DNA (708bp) protein (236aa)

This feature has no annotations

sw_9_scaffold_17_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8853..9416)
DNA (564bp) protein (188aa)
Tyrosine recombinase xerD n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4F3_SALRM
xerD; tyrosine recombinase XerD
Tyrosine recombinase xerD {ECO:0000313|EMBL:CBH22793.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_9_scaffold_17_10
unknown

Not on your lists

9630..9980
DNA (351bp) protein (117aa)

This feature has no annotations

sw_9_scaffold_17_11
Plasmodium knowlesi, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

comp(10260..12596)
DNA (2337bp) protein (779aa)
Circumsporozoite protein n=1 Tax=Plasmodium knowlesi RepID=F2VIH6_PLAKN
Circumsporozoite protein {ECO:0000313|EMBL:AHF20642.1}; TaxID=5850 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).;" source="
Microtubule/TRAF3 and DISC1 binding protein
sw_9_scaffold_17_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(13615..14670)
DNA (1056bp) protein (352aa)
RecA-family ATPase-like protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6N8_SPHTD
recombinase A
RecA-family ATPase-like protein {ECO:0000313|EMBL:ACZ39663.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.
sw_9_scaffold_17_13
unknown

Not on your lists

comp(14801..15103)
DNA (303bp) protein (101aa)

This feature has no annotations

sw_9_scaffold_17_14
unknown

Not on your lists

comp(15362..16300)
DNA (939bp) protein (313aa)

This feature has no annotations

sw_9_scaffold_17_15
unknown

Not on your lists

16419..16637
DNA (219bp) protein (73aa)

This feature has no annotations

sw_9_scaffold_17_16
Simkania negevensis, Simkania, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

16686..17816
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000372CBD1
intD; prophage DLP12 integrase
Prophage DLP12 integrase {ECO:0000313|EMBL:CCB89129.1}; TaxID=331113 species="Bacteria; Chlamydiae; Chlamydiales; Simkaniaceae; Simkania.;" source="Simkania negevensis (strain ATCC VR-1471 / Z).;"
sw_9_scaffold_17_trna_4
unknown

Not on your lists

comp(17975..18060)
DNA (86bp)
transferRNA
sw_9_scaffold_17_trna_3
unknown

Not on your lists

comp(18151..18224)
DNA (74bp)
transferRNA
sw_9_scaffold_17_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18383..20443)
DNA (2061bp) protein (687aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3F5_HALMD
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACV47627.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sourc
sw_9_scaffold_17_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20707..21123)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAP6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25101.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_17_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21157..22125)
DNA (969bp) protein (323aa)
pyrB; aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=24659283 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:CBH24450.1};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_0000
pyrB; aspartate carbamoyltransferase
sw_9_scaffold_17_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22183..22764)
DNA (582bp) protein (194aa)
Bifunctional protein PyrR n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2X2_SALRD
phosphoribosyl transferase domain-containing protein
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_9_scaffold_17_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23172..24104
DNA (933bp) protein (311aa)
hypothetical protein
hypothetical protein id=24659285 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45035.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_17_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24114..24698)
DNA (585bp) protein (195aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24453.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24659286 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_9_scaffold_17_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24874..26235)
DNA (1362bp) protein (454aa)
transporter
transporter id=24659287 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transporter, putative {ECO:0000313|EMBL:ABC44512.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_9_scaffold_17_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26455..31623)
DNA (5169bp) protein (1723aa)
hypothetical protein; K09800 hypothetical protein id=24659206 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24371.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_17_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31654..33912)
DNA (2259bp) protein (753aa)
yaeT; outer membrane protein assembly factor yaeT id=24659207 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
yaeT; outer membrane protein assembly factor yaeT
Outer membrane protein assembly factor yaeT [Precursor] {ECO:0000313|EMBL:CBH24372.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_9_scaffold_17_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34015..35115)
DNA (1101bp) protein (367aa)
yihY; YihY family protein
yihY; YihY family protein; K07058 membrane protein id=24659208 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
YihY family protein {ECO:0000313|EMBL:ABC44576.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_9_scaffold_17_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(35270..37423)
DNA (2154bp) protein (718aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8L9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24374.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_17_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(37469..38128)
DNA (660bp) protein (220aa)
Deoxynucleoside kinase subfamily, putative {ECO:0000313|EMBL:ABC45412.1}; EC=2.7.1.- {ECO:0000313|EMBL:ABC45412.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
deoxynucleoside kinase n=1 Tax=Salisaeta longa RepID=UPI0003B3D3C1
deoxynucleoside kinase subfamily protein
Displaying items 1-30 of 188 in total

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