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sw_9_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 219 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_2_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

136..2022
DNA (1887bp) protein (629aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacte
acnA; aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3] id=24659824 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
acnA; aconitate hydratase 1
sw_9_scaffold_2_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2107..2520
DNA (414bp) protein (138aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacte
Aconitate hydratase 1 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1F3_SALRD
acnA; aconitate hydratase 1
sw_9_scaffold_2_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2890..3402
DNA (513bp) protein (171aa)
hypothetical protein
hypothetical protein id=24659528 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24693.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3606..4283
DNA (678bp) protein (226aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S284_SALRD
msrA; methionine-S-sulfoxide reductase
sw_9_scaffold_2_5
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4381..5169)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AI37_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN47975.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resin
sw_9_scaffold_2_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5256..5678)
DNA (423bp) protein (141aa)
PIN domain protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9J1_SALRM
PIN domain-containing protein
PIN domain protein {ECO:0000313|EMBL:CBH24696.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_9_scaffold_2_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5687..5950)
DNA (264bp) protein (88aa)
hypothetical protein
hypothetical protein id=24659532 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24697.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6293..8161
DNA (1869bp) protein (623aa)
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C id=24659533 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=309807 species="Ba
sw_9_scaffold_2_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8492..8770
DNA (279bp) protein (93aa)
hypothetical protein
hypothetical protein id=24659661 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24827.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8907..9455
DNA (549bp) protein (183aa)
thiJ; intracellular protease I; K05520 protease I [EC:3.2.-.-] id=24659683 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
protease I
Intracellular protease I {ECO:0000313|EMBL:CBH24855.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_9_scaffold_2_11
unknown

Not on your lists

comp(9523..10074)
DNA (552bp) protein (184aa)

This feature has no annotations

sw_9_scaffold_2_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10400..12418
DNA (2019bp) protein (673aa)
peptidase n=1 Tax=Salisaeta longa RepID=UPI0003B3E25B
peptidase
Peptidase {ECO:0000313|EMBL:AEN73699.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-
sw_9_scaffold_2_13
unknown

Not on your lists

12415..12930
DNA (516bp) protein (172aa)

This feature has no annotations

sw_9_scaffold_2_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12795..14921)
DNA (2127bp) protein (709aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B68264
Uncharacterized protein {ECO:0000313|EMBL:GAD20541.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
polymorphic membrane protein
sw_9_scaffold_2_15

Not on your lists

comp(14936..15373)
DNA (438bp) protein (146aa)
Transposase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SCW2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKL58056.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
sw_9_scaffold_2_16
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

Not on your lists

comp(15370..16038)
DNA (669bp) protein (223aa)
Transposase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SCW1_9CHLR
Transposase {ECO:0000313|EMBL:BAL53997.1}; TaxID=166587 species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
putative transposase
sw_9_scaffold_2_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16246..16593)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBC3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25328.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16603..17184)
DNA (582bp) protein (194aa)
ATP:cob(I)alamin adenosyltransferase, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S313_SALRD
ATP:cob(I)alamin adenosyltransferase
ATP:cob(I)alamin adenosyltransferase, putative {ECO:0000313|EMBL:ABC45671.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
sw_9_scaffold_2_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17262..18080)
DNA (819bp) protein (273aa)
hmuV; hemin ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=24659240 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hemin ABC transporter ATP-binding protein {ECO:0000313|EMBL:CBH24406.1}; EC=3.6.3.34 {ECO:0000313|EMBL:CBH24406.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
hmuV; hemin ABC transporter ATP-binding protein
sw_9_scaffold_2_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18534..19268
DNA (735bp) protein (245aa)
hypothetical protein
hypothetical protein id=24659551 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24715.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19384..20505
DNA (1122bp) protein (374aa)
FAD dependent oxidoreductase
FAD dependent oxidoreductase id=24659552 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
FAD dependent oxidoreductase, putative {ECO:0000313|EMBL:ABC45155.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_9_scaffold_2_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20522..21586)
DNA (1065bp) protein (355aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
SUA5 protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9L3_SALRM
SUA5 protein
sw_9_scaffold_2_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21693..22142
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9L2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45731.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22525..22773)
DNA (249bp) protein (83aa)
hypothetical protein
hypothetical protein id=24659555 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24719.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22965..24896)
DNA (1932bp) protein (644aa)
hypothetical protein id=24659556 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24721.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25536..26369
DNA (834bp) protein (278aa)
hypothetical protein
hypothetical protein id=24659558 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24722.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_2_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26405..27646
DNA (1242bp) protein (414aa)
Peptidase M23B n=2 Tax=Salinibacter ruber RepID=D5H9L8_SALRM
M23 peptidase domain-containing protein
M23 peptidase domain protein {ECO:0000313|EMBL:ABC46357.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_9_scaffold_2_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27866..29284
DNA (1419bp) protein (473aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:CBH24724.1}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:CBH24724.1};; TaxID=761659 species="Bacteria; Bact
Dihydrolipoyl dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9L9_SALRM
pdhD; dihydrolipoyl dehydrogenase
sw_9_scaffold_2_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29435..31156)
DNA (1722bp) protein (574aa)
Aminopeptidase M1 family protein {ECO:0000313|EMBL:CBH24727.1}; EC=3.4.11.- {ECO:0000313|EMBL:CBH24727.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Aminopeptidase M1 family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9M2_SALRM
pepN; aminopeptidase M1 family protein
sw_9_scaffold_2_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31240..31941)
DNA (702bp) protein (234aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {E
MTA/SAH nucleosidase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2A4_SALRD
mtnN; MTA/SAH nucleosidase
Displaying items 1-30 of 219 in total

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