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sw_9_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 127 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_28_1
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86..574)
DNA (489bp) protein (163aa)
metal transporter n=1 Tax=Salisaeta longa RepID=UPI0003B3C477
Heavy metal efflux pump permease component CzcA family protein {ECO:0000313|EMBL:ERJ17471.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae;
CzcA family heavy metal efflux pump
sw_9_scaffold_28_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1545..1889)
DNA (345bp) protein (115aa)
Bacterial regulatory protein, ArsR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4U2_SALRM
arsR; ArsR family transcriptional regulator
Bacterial regulatory protein, ArsR {ECO:0000313|EMBL:CBH23047.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_9_scaffold_28_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1886..3304)
DNA (1419bp) protein (473aa)
lepB; signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] id=24657258 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Signal peptidase I {ECO:0000256|RuleBase:RU362042, ECO:0000313|EMBL:CBH23406.1}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042, ECO:0000313|EMBL:CBH23406.1};; TaxID=761659 species="Bacteria; Bacteroidet
lepB; signal peptidase I
sw_9_scaffold_28_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3316..4215)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5V0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44930.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_28_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4325..6139)
DNA (1815bp) protein (605aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
lepA; GTP-binding protein LepA
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA id=24657256 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_9_scaffold_28_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7032..7751)
DNA (720bp) protein (240aa)
lspA; signal peptidase (SPase) II; K03101 signal peptidase II [EC:3.4.23.36] id=24657255 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
lspA; lipoprotein signal peptidase
sw_9_scaffold_28_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7932..11276)
DNA (3345bp) protein (1115aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5D0_SALRD
ileS; isoleucyl-tRNA synthetase
sw_9_scaffold_28_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11604..12377)
DNA (774bp) protein (258aa)
hypothetical protein
hypothetical protein id=24657994 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25196.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_28_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12410..14005)
DNA (1596bp) protein (532aa)
crtI; phytoene dehydrogenase; K10027 phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] id=24657995 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
crtI; Phytoene dehydrogenase
Phytoene dehydrogenase {ECO:0000313|EMBL:ABC44467.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_9_scaffold_28_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14214..16139)
DNA (1926bp) protein (642aa)
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B59069
sensory box sensor histidine kianse/respons regulator
Sensory box sensor histidine kianse/response regulator {ECO:0000313|EMBL:ABC43756.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
sw_9_scaffold_28_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16136..16402)
DNA (267bp) protein (89aa)
chemotaxis protein CheY n=1 Tax=Salisaeta longa RepID=UPI0003B33ED7
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACY49287.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodo
sw_9_scaffold_28_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16596..18626)
DNA (2031bp) protein (677aa)
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B7B96A
sensory box sensor histidine kianse/respons regulator
Sensory box sensor histidine kianse/respons regulator {ECO:0000313|EMBL:CBH25199.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
sw_9_scaffold_28_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18769..19998)
DNA (1230bp) protein (410aa)
aroC; chorismate synthase; K01736 chorismate synthase [EC:4.2.3.5] id=24657998 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
aroC; chorismate synthase
sw_9_scaffold_28_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20124..21662)
DNA (1539bp) protein (513aa)
degP; serine protease do-like; K01362 [EC:3.4.21.-] id=24657999 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protease degQ {ECO:0000313|EMBL:ABC44961.1}; EC=3.4.21.- {ECO:0000313|EMBL:ABC44961.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
degP; serine protease do-like
sw_9_scaffold_28_15
unknown

Not on your lists

21735..21923
DNA (189bp) protein (63aa)

This feature has no annotations

sw_9_scaffold_28_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22029..22535
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC16_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25571.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_28_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22676..23608
DNA (933bp) protein (311aa)
histone deacetylase
histone deacetylase id=24658002 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Histone deacetylase {ECO:0000313|EMBL:CBH25204.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_9_scaffold_28_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23803..24552)
DNA (750bp) protein (250aa)
Sensory transduction protein lytR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H741_SALRM
lytR; sensory transduction protein lytR
Sensory transduction protein lytR {ECO:0000313|EMBL:CBH23846.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_9_scaffold_28_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24595..25677)
DNA (1083bp) protein (361aa)
Histidine kinase family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H742_SALRM
histidine kinase family
Histidine kinase family {ECO:0000313|EMBL:CBH23847.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_28_20
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(25893..26150)
DNA (258bp) protein (86aa)
Tax=BJP_IG2102_Ignavibacteriales_35_8
sw_9_scaffold_28_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26299..27375)
DNA (1077bp) protein (359aa)
nadA; Quinolinate synthetase A; K03517 quinolinate synthase [EC:2.5.1.72] id=24657836 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
nadA; Quinolinate synthetase A
sw_9_scaffold_28_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27430..28356)
DNA (927bp) protein (309aa)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:CBH25045.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CBH25045.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAJ0_SALRM
nadC; nicotinate-nucleotide pyrophosphorylase
sw_9_scaffold_28_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28493..29989)
DNA (1497bp) protein (499aa)
FAD binding domain-containing protein; K00278 L-aspartate oxidase [EC:1.4.3.16] id=24657838 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
nadB; Quinolinate synthetase B
FAD binding domain, putative {ECO:0000313|EMBL:ABC45601.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_9_scaffold_28_24

Not on your lists

comp(30719..33865)
DNA (3147bp) protein (1049aa)
Protein containing Serine/threonine protein kinase domain protein {ECO:0000313|EMBL:AGF93517.1}; EC=2.7.-.- {ECO:0000313|EMBL:AGF93517.1};; TaxID=155900 species="unclassified sequences; environmental
Protein containing Serine/threonine protein kinase domain protein n=1 Tax=uncultured organism RepID=M1Q2N8_9ZZZZ
serine/threonine protein kinase
sw_9_scaffold_28_25
unknown

Not on your lists

33989..34222
DNA (234bp) protein (78aa)

This feature has no annotations

sw_9_scaffold_28_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34619..35215)
DNA (597bp) protein (199aa)
Intracellular protease, PfpI family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5F8_SALRD
PfpI family intracellular peptidase
Intracellular protease, PfpI family {ECO:0000313|EMBL:ABC43767.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_9_scaffold_28_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(35748..36188)
DNA (441bp) protein (147aa)
DoxX family protein n=1 Tax=Salisaeta longa RepID=UPI0003B3C90A
DoxX subfamily protein
DoxX subfamily, putative {ECO:0000313|EMBL:ABC44552.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_9_scaffold_28_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(36373..36783)
DNA (411bp) protein (137aa)
hypothetical protein
hypothetical protein; K15977 putative oxidoreductase id=24657276 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23424.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_28_29
unknown

Not on your lists

37355..37573
DNA (219bp) protein (73aa)

This feature has no annotations

sw_9_scaffold_28_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

37806..40379
DNA (2574bp) protein (858aa)
Putative TonB-dependent outer membrane protein {ECO:0000313|EMBL:ABC44624.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
TonB-dependent outer membrane protein id=24657719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
TonB-dependent outer membrane protein
Displaying items 1-30 of 127 in total

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