ggKbase home page

sw_9_scaffold_36

Search features with annotation key words

Displaying items 31-60 of 86 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_36_31
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20172..20552
DNA (381bp) protein (127aa)
DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B4D3D2
hup; DNA-binding protein HU
Probable DNA-binding protein HU {ECO:0000313|EMBL:ABC45979.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_9_scaffold_36_32
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20645..21082
DNA (438bp) protein (146aa)
yqgF; Holliday junction resolvase; K07447 putative holliday junction resolvase [EC:3.1.-.-] id=24658987 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=761659 specie
yqgF; Holliday junction resolvase
sw_9_scaffold_36_33
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21093..22148)
DNA (1056bp) protein (352aa)
Uncharacterized ACR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H833_SALRM
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH24188.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_9_scaffold_36_34
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22168..22683)
DNA (516bp) protein (172aa)
HIT domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3N3_SALRD
HIT domain-containing protein
HIT domain protein {ECO:0000313|EMBL:ABC45310.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_9_scaffold_36_35
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22813..23655
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H832_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24187.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_36_36
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23696..24163
DNA (468bp) protein (156aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H834_SALRM
ribE; 6,7-dimethyl-8-ribityllumazine synthase
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
sw_9_scaffold_36_37
unknown

Not on your lists

comp(24064..24270)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_9_scaffold_36_trna_1
unknown

Not on your lists

24272..24345
DNA (74bp)
transferRNA
sw_9_scaffold_36_trna_2
unknown

Not on your lists

24391..24465
DNA (75bp)
transferRNA
sw_9_scaffold_36_38
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25057..27492
DNA (2436bp) protein (812aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B69E58
Serine/threonine protein kinase {ECO:0000313|EMBL:EIC21160.1}; Flags: Precursor;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" s
pknA; hypothetical protein
sw_9_scaffold_36_39
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27566..28762)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBU2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25497.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_36_40
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28911..29759
DNA (849bp) protein (283aa)
nth; endonuclease III; K10773 endonuclease III [EC:4.2.99.18] id=24658299 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:CBH25498.1}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:CBH25498.1};; DNA-(apurinic or apyrimidinic site) lyase
nth; endonuclease III
sw_9_scaffold_36_41
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29857..31428
DNA (1572bp) protein (524aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBU1_SALRM
gpmI; phosphoglyceromutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
sw_9_scaffold_36_42
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31441..33246)
DNA (1806bp) protein (602aa)
Protease IV {ECO:0000313|EMBL:CBH25495.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBH25495.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
Protease IV n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBU0_SALRM
sppA; Protease IV
sw_9_scaffold_36_43
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33706..34797
DNA (1092bp) protein (364aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBT9_SALRM
hrcA; Heat-inducible transcription repressor hrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
sw_9_scaffold_36_44
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35016..35678
DNA (663bp) protein (221aa)
grpE; co-chaperone GrpE; K03687 molecular chaperone GrpE id=24658295 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
grpE; co-chaperone GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II.
sw_9_scaffold_36_45
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35740..36885
DNA (1146bp) protein (382aa)
Chaperone protein DnaJ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBT7_SALRM
dnaJ; chaperone protein dnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_9_scaffold_36_46
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

37022..37567
DNA (546bp) protein (182aa)
oxidoreductase
oxidoreductase id=24658293 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Oxidoreductase, putative {ECO:0000313|EMBL:ABC45116.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_9_scaffold_36_47
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(37492..38337)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBT6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25491.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_36_48
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

38705..40120
DNA (1416bp) protein (472aa)
amt; ammonium transporter
amt; ammonium transporter; K03320 ammonium transporter, Amt family id=24658328 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_9_scaffold_36_49
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

40632..41408
DNA (777bp) protein (259aa)
hypothetical protein
hypothetical protein id=24659792 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46010.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_36_50
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

41860..43062
DNA (1203bp) protein (401aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
Asparaginyl-tRNA synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1I6_SALRD
asnS; asparaginyl-tRNA synthetase
sw_9_scaffold_36_51
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

43532..44257
DNA (726bp) protein (242aa)
hypothetical protein
hypothetical protein; K09807 hypothetical protein id=24659790 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45419.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_36_52
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

44382..45563
DNA (1182bp) protein (394aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H906_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45821.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_36_53
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

45896..46495
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H858_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43829.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_36_54
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(46515..47015)
DNA (501bp) protein (167aa)
hypothetical protein
hypothetical protein id=24659056 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24215.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_36_55
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

47246..48487
DNA (1242bp) protein (414aa)
acyl-CoA dehydrogenases; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] id=24659057 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acyl-CoA dehydrogenases {ECO:0000313|EMBL:CBH24216.1}; EC=1.3.99.- {ECO:0000313|EMBL:CBH24216.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
acyl-CoA dehydrogenases
sw_9_scaffold_36_56
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

48919..49518
DNA (600bp) protein (200aa)
dpsA; starvation induced DNA binding protein id=24659058 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
dpsA; starvation induced DNA binding protein
Starvation induced DNA binding protein {ECO:0000313|EMBL:CBH24217.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_9_scaffold_36_57
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

50196..52793
DNA (2598bp) protein (866aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=518766 species="Bacteria; Bacteroide
DNA topoisomerase 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H863_SALRM
topA; DNA topoisomerase I
sw_9_scaffold_36_58
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(52923..53894)
DNA (972bp) protein (324aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3I5_SALRD
rsgA; ribosome-associated GTPase
Displaying items 31-60 of 86 in total

View Taxonomy