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sw_9_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 86 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_36_1
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

2..100
DNA (99bp) protein (33aa)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadete
sw_9_scaffold_36_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


210..521
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=2 Tax=Salinibacter ruber RepID=RS10_SALRD
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000313|EMBL:CBH24155.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_9_scaffold_36_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1034..1681
DNA (648bp) protein (216aa)
50S ribosomal protein L3 n=1 Tax=Salisaeta longa RepID=UPI0003B4A252
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
sw_9_scaffold_36_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1765..2412
DNA (648bp) protein (216aa)
rplD; 50S ribosomal protein L4/L1 family protein
rplD; 50S ribosomal protein L4/L1 family protein; K02926 large subunit ribosomal protein L4 id=24658959 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L4 {ECO:0000255|HAMAP-Rule:MF_01328}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_9_scaffold_36_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2461..2760
DNA (300bp) protein (100aa)
rplW; 50S ribosomal protein L23
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=24658960 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_9_scaffold_36_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2841..3692
DNA (852bp) protein (284aa)
rplB; 50S ribosomal protein L2
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=24658961 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000313|EMBL:CBH24160.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_9_scaffold_36_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3754..4050
DNA (297bp) protein (99aa)
30S ribosomal protein S19 n=2 Tax=Salinibacter ruber RepID=RS19_SALRD
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531, ECO:0000313|EMBL:CBH24161.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_9_scaffold_36_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4155..4499
DNA (345bp) protein (115aa)
50S ribosomal protein L22 n=2 Tax=Salinibacter ruber RepID=RL22_SALRD
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004008, ECO:0000313|EMBL:CBH24162.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
sw_9_scaffold_36_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4566..5282
DNA (717bp) protein (239aa)
30S ribosomal protein S3 n=3 Tax=Salinibacter ruber RepID=RS3_SALRD
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309, ECO:0000313|EMBL:CBH24163.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_9_scaffold_36_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5344..5778
DNA (435bp) protein (145aa)
rplP; 50S ribosomal protein L16
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=24658965 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_9_scaffold_36_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5957..6160
DNA (204bp) protein (68aa)
rpmC; 50S ribosomal protein L29
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=24658966 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374, ECO:0000313|EMBL:CBH24165.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_9_scaffold_36_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


6223..6507
DNA (285bp) protein (95aa)
30S ribosomal protein S17 n=2 Tax=Salinibacter ruber RepID=RS17_SALRD
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_9_scaffold_36_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


6593..6961
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Salinibacter ruber RepID=RL14_SALRD
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_9_scaffold_36_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


7016..7387
DNA (372bp) protein (124aa)
rplX; 50S ribosomal protein L24
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=24658969 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326, ECO:0000313|EMBL:CBH24168.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_9_scaffold_36_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


7526..8104
DNA (579bp) protein (193aa)
rplE; 50S ribosomal protein L5
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=24658970 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
sw_9_scaffold_36_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


8149..8418
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=2 Tax=Salinibacter ruber RepID=RS14_SALRD
rpS; 30S ribosomal protein S14
30S ribosomal protein S14; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;
sw_9_scaffold_36_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


8495..8896
DNA (402bp) protein (134aa)
rpsH; 30S ribosomal protein S8
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=24658972 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302, ECO:0000313|EMBL:CBH24171.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_9_scaffold_36_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


8953..9504
DNA (552bp) protein (184aa)
rplF; 50S ribosomal protein L6
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=24658973 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
sw_9_scaffold_36_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


9559..9918
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H818_SALRM
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000313|EMBL:CBH24173.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_9_scaffold_36_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


9972..10499
DNA (528bp) protein (176aa)
rpsE; 30S ribosomal protein S5
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=24658975 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_9_scaffold_36_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


10826..11299
DNA (474bp) protein (158aa)
50S ribosomal protein L15 n=3 Tax=Salinibacter ruber RepID=RL15_SALRD
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_9_scaffold_36_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


11350..12678
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY n=2 Tax=Salinibacter ruber RepID=D5H821_SALRM
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
sw_9_scaffold_36_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12758..13582
DNA (825bp) protein (275aa)
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] id=24658978 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map; methionine aminopeptidase
sw_9_scaffold_36_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13582..13803
DNA (222bp) protein (74aa)
infA; translation initiation factor IF-1
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=24658979 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_9_scaffold_36_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


13899..14282
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=2 Tax=Salinibacter ruber RepID=RS13_SALRD
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:CBH24179.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_9_scaffold_36_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


14339..14740
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H825_SALRM
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CBH24180.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_9_scaffold_36_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


15121..15723
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=2 Tax=Salinibacter ruber RepID=RS4_SALRD
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:CBH24181.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_9_scaffold_36_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15837..16823
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24658983 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:
rpoA; DNA-directed RNA polymerase subunit alpha
sw_9_scaffold_36_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


16928..17473
DNA (546bp) protein (182aa)
rplQ; 50S ribosomal protein L17
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=24658984 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_9_scaffold_36_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17762..20002
DNA (2241bp) protein (747aa)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:CBH24184.1}; EC=3.1.7.2 {ECO:0000313|EMBL:CBH24184.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H829_SALRM
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Displaying items 1-30 of 86 in total

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