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sw_9_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 278 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_9_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(504..2228)
DNA (1725bp) protein (575aa)
Serine protease / subtilase peptidase {ECO:0000313|EMBL:ABC45253.1}; EC=3.4.21.- {ECO:0000313|EMBL:ABC45253.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Serine protease / subtilase peptidase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S523_SALRD
Serine protease / subtilase peptidase
sw_9_scaffold_9_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2318..2899)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44843.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_9_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(3107..4996)
DNA (1890bp) protein (630aa)
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|
Aspartate--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYD_SALRD
aspS; aspartyl-tRNA synthetase
sw_9_scaffold_9_4
unknown

Not on your lists

5364..5462
DNA (99bp) protein (33aa)

This feature has no annotations

sw_9_scaffold_9_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5504..6661
DNA (1158bp) protein (386aa)
NADH:flavin oxidoreductases, Old Yellow Enzyme family {ECO:0000313|EMBL:CBH24811.1}; EC=1.-.-.- {ECO:0000313|EMBL:CBH24811.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. I
NADH:flavin oxidoreductases, Old Yellow Enzyme family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9V6_SALRM
nemA; NADH:flavin oxidoreductase
sw_9_scaffold_9_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6718..7014
DNA (297bp) protein (99aa)
hypothetical protein
hypothetical protein; K06911 id=24659647 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DUF209:Cupin domain {ECO:0000313|EMBL:ABC44920.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_9_scaffold_9_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7137..7607
DNA (471bp) protein (157aa)
Pirin-related protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9V8_SALRM
Pirin-like protein
Pirin-related protein {ECO:0000313|EMBL:CBH24813.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_9_scaffold_9_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7978..9708
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003639D80
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:AEN74241.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodotherm
sw_9_scaffold_9_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9810..10262
DNA (453bp) protein (151aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S160_SALRD
dut; deoxyuridine 5`-triphosphate nucleotidohydrolase
sw_9_scaffold_9_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10575..11471
DNA (897bp) protein (299aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-dipho
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Salinibacter ruber RepID=ISPE_SALRD
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
sw_9_scaffold_9_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11583..12566
DNA (984bp) protein (328aa)
Thioredoxin reductase {ECO:0000313|EMBL:CBH23764.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CBH23764.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Thioredoxin reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6V9_SALRM
trxB; Thioredoxin reductase
sw_9_scaffold_9_12
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12988..14586)
DNA (1599bp) protein (533aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWA2_Ignavibacteriae_55_25_curated
D-3-phosphoglycerate dehydrogenase id=4187956 bin=GWA2_Ignavibacteriae_55_25 species=Capsaspora owczarzaki genus=Capsaspora taxon_order=unknown taxon_class=Ichthyosporea phylum=unknown tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
serA; D-3-phosphoglycerate dehydrogenase
sw_9_scaffold_9_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14846..15433)
DNA (588bp) protein (196aa)
GTP-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B62874
small GTP-binding protein
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
sw_9_scaffold_9_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15948..16817)
DNA (870bp) protein (290aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699, ECO:0000313|EMBL:CBH23767.1};; TaxID=761659 species="Bacteria; Bacteroidetes
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6W2_SALRM
sucD; succinyl-CoA synthetase subunit alpha
sw_9_scaffold_9_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17182..18738)
DNA (1557bp) protein (519aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120, ECO:0000313|EMBL:CBH23768.1}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6W3_SALRM
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A
sw_9_scaffold_9_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18826..19170)
DNA (345bp) protein (115aa)
Sec-independent protein translocase protein TatA n=2 Tax=Salinibacter ruber RepID=Q2S4S1_SALRD
tatB; Sec-independent protein translocase protein TatB
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
sw_9_scaffold_9_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19518..20603
DNA (1086bp) protein (362aa)
add; Adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4] id=24657540 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Adenosine deaminase {ECO:0000313|EMBL:ABC44258.1}; EC=3.5.4.4 {ECO:0000313|EMBL:ABC44258.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
add; Adenosine deaminase
sw_9_scaffold_9_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20906..22201
DNA (1296bp) protein (432aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] id=24657541 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase
sw_9_scaffold_9_19
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22490..25540
DNA (3051bp) protein (1017aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4B9CE
cell wall associated biofilm protein Tax=RBG_16_Ignavibacteria_34_14_curated
transmembrane protein, putative
sw_9_scaffold_9_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25585..26061)
DNA (477bp) protein (159aa)
guanine deaminase; cytidine and deoxycytidylate deaminase family (EC:3.5.4.3)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FF0932
dCMP deaminase {ECO:0000313|EMBL:KGM31616.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;
sw_9_scaffold_9_21
unknown

Not on your lists

comp(26519..26710)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_9_scaffold_9_22
unknown

Not on your lists

comp(27091..27258)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_9_scaffold_9_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27428..28360)
DNA (933bp) protein (311aa)
usp; universal stress protein Usp
usp; universal stress protein Usp id=24657544 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Universal stress protein {ECO:0000313|EMBL:ABC46001.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_9_scaffold_9_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28794..29630
DNA (837bp) protein (279aa)
DNA-binding protein
DNA-binding protein id=24657548 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative DNA-binding protein {ECO:0000313|EMBL:ABC45640.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_9_scaffold_9_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29801..30994)
DNA (1194bp) protein (398aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=24657550 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00186763};; 1-hydroxy-2-methyl-2
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
sw_9_scaffold_9_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31151..32086)
DNA (936bp) protein (312aa)
Rhomboid family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6X5_SALRM
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:CBH23780.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_9_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32337..33083)
DNA (747bp) protein (249aa)
cytoplasmic membrane protein
cytoplasmic membrane protein id=24657552 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Rhomboid-like protein {ECO:0000313|EMBL:CBH23781.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_9_scaffold_9_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33423..34130
DNA (708bp) protein (236aa)
serine/threonine protein phosphatase family protein; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=24657553 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
serine/threonine protein phosphatase family protein
Ser/Thr protein phosphatase superfamily {ECO:0000313|EMBL:ABC44365.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_9_scaffold_9_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34248..36665
DNA (2418bp) protein (806aa)
Transglycosylase domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4Q7_SALRD
transglycosylase domain-containing protein
Transglycosylase domain protein {ECO:0000313|EMBL:ABC43731.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_9_scaffold_9_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

36784..38061
DNA (1278bp) protein (426aa)
Exonuclease SbcD n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6X9_SALRM
sbcD; Exonuclease SbcD
Exonuclease SbcD {ECO:0000313|EMBL:CBH23784.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
Displaying items 1-30 of 278 in total

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