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sw_9_scaffold_189

Search features with annotation key words

Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_189_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..1795)
DNA (1794bp) protein (598aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D7I8_9EURY
DNA double-strand break repair Rad50 ATPase
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Ha
sw_9_scaffold_189_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1792..3120)
DNA (1329bp) protein (443aa)
metallophosphatase n=1 Tax=Halomicrobium katesii RepID=UPI0003659CD6
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACV49004.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
sw_9_scaffold_189_3
unknown

Not on your lists

3168..3839
DNA (672bp) protein (224aa)

This feature has no annotations

sw_9_scaffold_189_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3832..4092)
DNA (261bp) protein (87aa)
NP1176A family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISN4_NATPD
transcription regulator
NP_1176A family transcription regulator {ECO:0000313|EMBL:CAI48852.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_9_scaffold_189_5
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4265..5476
DNA (1212bp) protein (404aa)
Proteasome-activating nucleotidase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LGP3_9EURY
pan_2; proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553, ECO:0000313|EMBL:EMA31579.1}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; P
sw_9_scaffold_189_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5662..6432)
DNA (771bp) protein (257aa)
Putative methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPZ7_9EURY
Putative methyltransferase {ECO:0000313|EMBL:EMA46814.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
methylase
sw_9_scaffold_189_7
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6530..6664)
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:AFO58373.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_9_scaffold_189_8
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6935..7132)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J0J5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR49882.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_9_scaffold_189_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7234..7824
DNA (591bp) protein (197aa)
Acyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGF5_9EURY
acyltransferase
Acyltransferase {ECO:0000313|EMBL:ELZ34525.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
sw_9_scaffold_189_10

Not on your lists

7821..8222
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y400_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS09523.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_9_scaffold_189_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8254..9438
DNA (1185bp) protein (395aa)
Translation-associated GTPase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KJ64_9EURY
Translation-associated GTPase {ECO:0000313|EMBL:EMA21402.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytic
ychF; translation-associated GTPase
sw_9_scaffold_189_12
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9477..10631)
DNA (1155bp) protein (385aa)
Lycopene cyclase domain protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCB4_9EURY
Lycopene cyclase domain protein {ECO:0000313|EMBL:EMA67802.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense J
lycopene cyclase domain
sw_9_scaffold_189_13
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10984..11199)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:AHB68246.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_9_scaffold_189_14
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11278..12393)
DNA (1116bp) protein (372aa)
aspC2; pyridoxal phosphate-dependent aminotransferase (probable aspartate aminotransferase) (EC:2.6.1.-)
Aspartate aminotransferase n=2 Tax=Halarchaeum acidiphilum RepID=U2YDP7_9EURY
Aspartate aminotransferase {ECO:0000313|EMBL:GAD51801.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sw_9_scaffold_189_15
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12616..13653
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. J07HR59 RepID=U1NIW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH03470.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
ssuA; putative sulfonate ABC transporter periplasmic substrate-binding protein
sw_9_scaffold_189_16
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13655..14443
DNA (789bp) protein (263aa)
ssuC; ABC-type transport system permease protein (probable substrate nitrate/sulfonate/bicarbonate) id=24635633 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:ERH03471.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; H
ssuC; ABC-type transport system permease protein (probable substrate nitrate/sulfonate/bicarbonate)
sw_9_scaffold_189_17

Not on your lists

14440..15201
DNA (762bp) protein (254aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=2 Tax=Archaea RepID=U1QDU7_9EURY
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:ESS12404.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ssuB; ABC-type transport system ATP-binding protein (probable substrate nitrate/sulfonate/bicarbonate)
sw_9_scaffold_189_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15228..15386)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DIK8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34532.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_9_scaffold_189_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15707..15931
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUA1_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI48280.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_9_scaffold_189_20
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15966..16388
DNA (423bp) protein (141aa)
Polyketide cyclase/dehydrase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYF5_HALVA
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:EMA01892.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis
hypothetical protein
sw_9_scaffold_189_21
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16600..17628)
DNA (1029bp) protein (343aa)
glucose-fructose oxidoreductase (EC:1.1.99.28)
Glucose-fructose oxidoreductase {ECO:0000313|EMBL:AEH36491.1}; EC=1.1.99.28 {ECO:0000313|EMBL:AEH36491.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Hal
Glucose-fructose oxidoreductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7L2_HALXS
sw_9_scaffold_189_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17665..18699)
DNA (1035bp) protein (345aa)
Transcription regulator (Homolog to phosphate uptake regulator) n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISV1_NATPD
phoU_5; transport system regulatory protein ( substrate phosphate)
Transcription regulator (Homolog to phosphate uptake regulator) {ECO:0000313|EMBL:CAI48784.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
sw_9_scaffold_189_23
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18759..19826)
DNA (1068bp) protein (356aa)
ATP-NAD/AcoX kinase n=2 Tax=Haloarcula hispanica RepID=G0HR86_HALHT
N-acetylglucosamine-1-phosphate uridyltransferase
N-acetylglucosamine-1-phosphate uridyltransferase {ECO:0000313|EMBL:AJF27002.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
sw_9_scaffold_189_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20183..21631
DNA (1449bp) protein (483aa)
archaeosine tRNA-ribosyltransferase type 2 (EC:2.4.2.-)
tRNA-guanine transglycosylase, various specificities n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R016_9EURY
tRNA-guanine transglycosylase, various specificities {ECO:0000313|EMBL:EFW89910.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sourc
sw_9_scaffold_189_25
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21768..21953
DNA (186bp) protein (62aa)
tRNA-guanine transglycosylase, various specificities n=1 Tax=Halobacterium sp. DL1 RepID=G4IEV9_9EURY
tRNA-ribosyltransferase {ECO:0000313|EMBL:AHG04705.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
tgtA2; archaeosine tRNA-ribosyltransferase
sw_9_scaffold_189_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21994..22377
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y5Z1_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37985.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_189_27
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22374..23174)
DNA (801bp) protein (267aa)
Hydrolase ( hydroxyacylglutathione hydrolase ) 3 n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C1J8_9EURY
Hydrolase (Hydroxyacylglutathione hydrolase) 3 {ECO:0000313|EMBL:ELZ17070.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
hydrolase ( hydroxyacylglutathione hydrolase ) 3
sw_9_scaffold_189_28
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23260..23532
DNA (273bp) protein (91aa)
MoaD family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU03_NATM8
moaD2; MoaD family protein
Ubiquitin-like modifier protein SAMP3 {ECO:0000313|EMBL:CCQ37984.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_9_scaffold_189_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23529..23783
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8Z5_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14330.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_9_scaffold_189_30
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23785..24150
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R024_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89918.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
Displaying items 1-30 of 61 in total

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