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sw_9_scaffold_195

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Displaying items 1-30 of 66 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_195_1

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221..592
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XW38_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06428.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_9_scaffold_195_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

667..996
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D567_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29314.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_9_scaffold_195_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1045..2565
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27495.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_195_4
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2555..2995)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NUP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34123.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_9_scaffold_195_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3070..4098
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87607.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_9_scaffold_195_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4136..4705)
DNA (570bp) protein (190aa)
Receiver box response regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSK8_NATM8
receiver box response regulator
Receiver box response regulator {ECO:0000313|EMBL:CCQ37360.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moola
sw_9_scaffold_195_7
unknown

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comp(4740..5306)
DNA (567bp) protein (189aa)

This feature has no annotations

sw_9_scaffold_195_trna_2
unknown

Not on your lists

comp(5079..5151)
DNA (73bp)
transferRNA
sw_9_scaffold_195_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5388..5615
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1};; TaxID=358396 species="
DNA-directed RNA polymerase subunit H n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LI08_9EURY
DNA-directed RNA polymerase, subunit H, RpoH/RPB5
sw_9_scaffold_195_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5616..7178
DNA (1563bp) protein (521aa)
rpoB2; DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:CAI48146.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48146.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN4_NATPD
sw_9_scaffold_195_10
Halobacteriaceae archaeon YC89, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7180..8664
DNA (1485bp) protein (495aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1126241 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
RNA polymerase subunit B n=1 Tax=Halorientalis regularis RepID=U3MZG6_9EURY
sw_9_scaffold_195_11
Halomicroarcula limicola, Halomicroarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8654..8923
DNA (270bp) protein (90aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1429915 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoB'; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
RNA polymerase subunit B n=1 Tax=Halobacteriaceae archaeon YGHS32 RepID=V5RK60_9EURY
sw_9_scaffold_195_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8925..9305
DNA (381bp) protein (127aa)
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN2_NATPD
sw_9_scaffold_195_13
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(9797..10873)
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=RBG_13_Chloroflexi_68_17_curated
sw_9_scaffold_195_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10881..11795
DNA (915bp) protein (305aa)
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN2_NATPD
sw_9_scaffold_195_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11788..14469
DNA (2682bp) protein (894aa)
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
sw_9_scaffold_195_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14511..15005
DNA (495bp) protein (165aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
transcription elongation factor NusA-like protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sourc
sw_9_scaffold_195_17
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15047..15268
DNA (222bp) protein (74aa)
Transcription elongation factor NusA-like protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X4Y0_9EURY
Transcription elongation factor NusA-like protein {ECO:0000313|EMBL:AKH97003.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" so
NusA family KH domain-containing protein
sw_9_scaffold_195_18
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15831..16247
DNA (417bp) protein (139aa)
Nucleotidyltransferase protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XSI8_9EURY
Nucleotidyltransferase protein {ECO:0000313|EMBL:ELY63588.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10
nucleotidyltransferase domain protein
sw_9_scaffold_195_19

Not on your lists

16247..16687
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q638_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS08662.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_9_scaffold_195_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16751..17179
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGL6_9EURY
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_9_scaffold_195_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17176..17793
DNA (618bp) protein (206aa)
30S ribosomal protein S7 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYI2_HALMD
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.
sw_9_scaffold_195_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17914..18201
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0Q1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48424.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_9_scaffold_195_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18393..18863
DNA (471bp) protein (157aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-) id=24648839 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Dehydrogenase {ECO:0000313|EMBL:ERH09971.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_9_scaffold_195_24
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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18943..20175
DNA (1233bp) protein (411aa)
mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YR83_9EURY
mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:ELY76186.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema
epf3; mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase
sw_9_scaffold_195_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20217..20786
DNA (570bp) protein (190aa)
HAD superfamily hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTU9_NATM8
HAD superfamily hydrolase
HAD superfamily hydrolase {ECO:0000313|EMBL:CCQ37871.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_9_scaffold_195_26
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20783..21514)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C6P5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ18946.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
sw_9_scaffold_195_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22046..22438
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43225.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_195_28
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22526..22807)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLK2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37868.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_195_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22857..25220)
DNA (2364bp) protein (788aa)
DEAD/DEAH box helicase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4S1_9EURY
DEAD/DEAH box helicase {ECO:0000313|EMBL:ELZ29164.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
DEAD/DEAH box helicase domain protein
Displaying items 1-30 of 66 in total

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