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sw_9_scaffold_244

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_244_1
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..189
DNA (189bp) protein (63aa)
Glutaredoxin-like protein n=2 Tax=Halorubrum RepID=M0DUQ7_9EURY
Glutaredoxin-like protein {ECO:0000313|EMBL:ELZ39260.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM
glutaredoxin-like protein
sw_9_scaffold_244_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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219..461
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037F4260
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47559.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_9_scaffold_244_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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569..748
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA04605.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
sw_9_scaffold_244_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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941..1996
DNA (1056bp) protein (352aa)
Peptidase U61 LD-carboxypeptidase A n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX60_9EURY
Peptidase U61 LD-carboxypeptidase A {ECO:0000313|EMBL:EFW90863.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
putative MccF-like protein (microcin C7 resistance)
sw_9_scaffold_244_5
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2098..3447
DNA (1350bp) protein (450aa)
glycoside hydrolase family 68 (EC:2.4.1.10)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003629FA5
Glycoside hydrolase family 68 {ECO:0000313|EMBL:EMA66706.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM
sw_9_scaffold_244_6
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3448..5595)
DNA (2148bp) protein (716aa)
Glycosyl hydrolase family 32 n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PAA0_9EURY
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EMA67057.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 149
glycosyl hydrolase family 32
sw_9_scaffold_244_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5844..6659
DNA (816bp) protein (272aa)
Bile acid:sodium symporter n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY93_HALMD
sodium symporter
Bile acid:sodium symporter {ECO:0000313|EMBL:ACV48553.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
sw_9_scaffold_244_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6530..9154)
DNA (2625bp) protein (875aa)
Zinc-transporting ATPase n=1 Tax=Halogranum salarium B-1 RepID=J3JCX4_9EURY
Zinc-transporting ATPase {ECO:0000313|EMBL:EJN56989.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
zntA1; zinc-transporting ATPase
sw_9_scaffold_244_9
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9337..10281)
DNA (945bp) protein (315aa)
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NH90_9EURY
DNA adenine methylase {ECO:0000313|EMBL:ELZ30157.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
sw_9_scaffold_244_10
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10418..11539
DNA (1122bp) protein (374aa)
ABC transporter-related protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BB01_9EURY
ABC transporter-related protein {ECO:0000313|EMBL:ELZ08076.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermoto
ABC-type multidrug transport system, ATPase component
sw_9_scaffold_244_11
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11536..12360
DNA (825bp) protein (275aa)
ABC-2 type transporter n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VS20_9EURY
ABC-2 type transporter {ECO:0000313|EMBL:ELY39792.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
ABC transporter permease
sw_9_scaffold_244_trna_1
unknown

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comp(12518..12590)
DNA (73bp)
transferRNA
sw_9_scaffold_244_12
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12672..13001)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HL58_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ83834.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
sw_9_scaffold_244_13
unknown

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comp(13593..13796)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_9_scaffold_244_14

Not on your lists

13883..14959
DNA (1077bp) protein (359aa)
Periplasmic serine proteases (ClpP class) n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3C5_9ARCH
Periplasmic serine proteases (ClpP class) {ECO:0000313|EMBL:ESS05502.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
peptidase S49
sw_9_scaffold_244_15

Not on your lists

14956..16029
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XTI2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05503.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_9_scaffold_244_16

Not on your lists

comp(16036..17478)
DNA (1443bp) protein (481aa)
MATE efflux family protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHF3_9ARCH
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AEN06548.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_9_scaffold_244_17
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17618..18511
DNA (894bp) protein (298aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:ADQ65980.1}; EC=1.1.1.44 {ECO:0000313|EMBL:ADQ65980.1};; 6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:ELY23136.1
6-phosphogluconate dehydrogenase (Decarboxylating) n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NKT4_HALBP
sw_9_scaffold_244_18
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(18605..19240)
DNA (636bp) protein (212aa)
Transposase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z3H5_9EURY
Transposase {ECO:0000313|EMBL:ELY79733.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
transposase
Displaying 19 items

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