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sw_9_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 124 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_55_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

193..1110
DNA (918bp) protein (306aa)
formamidase (EC:3.5.1.49)
Formamidase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ34_9EURY
Formamidase {ECO:0000313|EMBL:EFW90195.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
sw_9_scaffold_55_2
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1159..1332
DNA (174bp) protein (58aa)
Formamidase {ECO:0000313|EMBL:ELY59530.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;"
sw_9_scaffold_55_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1329..2114
DNA (786bp) protein (262aa)
Formamidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCL5_9EURY
Formamidase {ECO:0000313|EMBL:EMA55571.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
putative acetamidase/formamidase
sw_9_scaffold_55_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2133..3047)
DNA (915bp) protein (305aa)
cation transporter n=1 Tax=Halomicrobium katesii RepID=UPI00038014A9
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ELZ28150.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
cation diffusion facilitator family transporter
sw_9_scaffold_55_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3150..3527
DNA (378bp) protein (126aa)
30S ribosomal protein S8e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN16_NATPD
rps8R; 30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_9_scaffold_55_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3566..4561)
DNA (996bp) protein (332aa)
Transcription regulator (Homolog to phosphate uptake regulator) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS11_NATPD
abc14r_1; ABC transporter
Transcription regulator (Homolog to phosphate uptake regulator) {ECO:0000313|EMBL:CAI49079.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
sw_9_scaffold_55_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4845..5525
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIW8_9EURY
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
phosphate uptake regulator PhoU
sw_9_scaffold_55_8
unknown

Not on your lists

comp(5529..5876)
DNA (348bp) protein (116aa)

This feature has no annotations

sw_9_scaffold_55_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6191..6526
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKP7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36282.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_55_trna_1
unknown

Not on your lists

6687..6771
DNA (85bp)
transferRNA
sw_9_scaffold_55_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6823..7323
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQB9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49677.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_9_scaffold_55_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7369..8955)
DNA (1587bp) protein (529aa)
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent n=1 Tax=Halogranum salarium B-1 RepID=J3JGU5_9EURY
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent {ECO:0000313|EMBL:EJN60401.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.
phosphoribosylformylglycinamidine synthase, clade II
sw_9_scaffold_55_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9122..10495
DNA (1374bp) protein (458aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK10_9EURY
sw_9_scaffold_55_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10487..10984)
DNA (498bp) protein (166aa)
hypothetical protein
hypothetical protein id=24614651 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88881.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
sw_9_scaffold_55_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11245..12144
DNA (900bp) protein (300aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=348780 species
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DAPA_NATPD
sw_9_scaffold_55_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12141..12869
DNA (729bp) protein (243aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000255|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000255|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000255|HAMAP-Rule:MF_00102};; TaxID=348780 spec
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DAPB_NATPD
sw_9_scaffold_55_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12866..13702
DNA (837bp) protein (279aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CAI48838.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CAI48838.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteri
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISP8_NATPD
sw_9_scaffold_55_17
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13800..15026
DNA (1227bp) protein (409aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IWR4_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
sw_9_scaffold_55_18
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15023..15889
DNA (867bp) protein (289aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000313|EMBL:ELZ85704.1}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1
Diaminopimelate epimerase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HRF9_9EURY
diaminopimelate epimerase
sw_9_scaffold_55_19
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15882..16964
DNA (1083bp) protein (361aa)
Peptidase M20-M25-M40 superfamily protein (EC:3.4.-.-)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GP73_HALL2
Acetylornithine deacetylase {ECO:0000313|EMBL:CQR50418.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sw_9_scaffold_55_20

Not on your lists

17013..17519
DNA (507bp) protein (169aa)
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y232_9ARCH
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit {ECO:0000313|EMBL:ESS08748.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon
prefoldin subunit alpha
sw_9_scaffold_55_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17972..18370
DNA (399bp) protein (133aa)
Nascent polypeptide-associated complex protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW56_9EURY
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
nac; nascent polypeptide-associated complex protein
sw_9_scaffold_55_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18367..19104
DNA (738bp) protein (246aa)
trmI; tRNA (adenine-N(1))-methyltransferase TrmI (EC:2.1.1.219)
tRNA (Adenine-N(1))-methyltransferase TrmI {ECO:0000313|EMBL:CCQ37829.1}; EC=2.1.1.219 {ECO:0000313|EMBL:CCQ37829.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
tRNA (Adenine-N(1))-methyltransferase TrmI n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTL7_NATM8
sw_9_scaffold_55_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19159..19401
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWK3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48213.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_9_scaffold_55_24
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19415..19762
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EL75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ47858.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_9_scaffold_55_25
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19755..20303)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KMS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA21449.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_9_scaffold_55_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20340..20642)
DNA (303bp) protein (101aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
DNA-directed RNA polymerase subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTJ3_NATM8
tfs1; transcription elongation factor TFS
sw_9_scaffold_55_27
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20736..21023)
DNA (288bp) protein (96aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferaca
DNA-directed RNA polymerase subunit n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0H920_9EURY
DNA-directed RNA polymerase subunit M 1
sw_9_scaffold_55_28

Not on your lists

21222..22256
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XTQ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11959.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_9_scaffold_55_29
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22356..23675
DNA (1320bp) protein (440aa)
Multidrug resistance protein-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQW9_HALAR
Multidrug resistance protein-like protein {ECO:0000313|EMBL:EMA23616.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
major facilitator superfamily protein
Displaying items 1-30 of 124 in total

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