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sw_9_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 66 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_56_1
unknown

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_9_scaffold_56_2
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(92..415)
DNA (324bp) protein (108aa)
V-type ATP synthase subunit F n=2 Tax=Natrialba RepID=D3ST05_NATMM
Vacuolar H+transporting two-sector ATPase F subunit
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrial
sw_9_scaffold_56_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(412..1467)
DNA (1056bp) protein (352aa)
V-type ATP synthase subunit C (EC:3.6.3.14)
ATP synthase subunit C n=1 Tax=Halomicrobium katesii RepID=UPI00036222BE
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_9_scaffold_56_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1464..2048)
DNA (585bp) protein (195aa)
atpE; V-type ATP synthase subunit E (EC:3.6.3.14)
V-type ATP synthase subunit E n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=VATE_NATPD
V-type ATP synthase subunit E; V-ATPase subunit E {ECO:0000255|HAMAP-Rule:MF_00311}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sour
sw_9_scaffold_56_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2073..2330)
DNA (258bp) protein (86aa)
atpK; A-type ATP synthase subunit K (EC:3.6.3.14)
A-type ATP synthase subunit K {ECO:0000313|EMBL:CCQ35522.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CCQ35522.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
A-type ATP synthase subunit K n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNM2_NATM8
sw_9_scaffold_56_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2470..4662)
DNA (2193bp) protein (731aa)
V-type ATPase 116 kDa subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2S5_HALMD
V-type ATPase 116 kDa subunit
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_9_scaffold_56_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4649..4981)
DNA (333bp) protein (111aa)
ATP synthase H subunit n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNT2_HALUD
ATP synthase H subunit
ATP synthase H subunit {ECO:0000313|EMBL:ACV11607.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strai
sw_9_scaffold_56_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5366..6295)
DNA (930bp) protein (310aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MAR1_HALMO
ribonuclease Z
sw_9_scaffold_56_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6461..7771
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBS2_9EURY
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:AHG02565.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
hypothetical protein
sw_9_scaffold_56_10
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7900..9078
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IH06_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB17516.1}; Flags: Precursor;; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber
sw_9_scaffold_56_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9354..10289)
DNA (936bp) protein (312aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] id=24614164 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ESP89247.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ESP89247.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
branched-chain amino acid aminotransferase (EC:2.6.1.42)
sw_9_scaffold_56_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10329..10442)
DNA (114bp) protein (38aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=1261545 specie
sw_9_scaffold_56_13
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10634..10900
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KDE58005.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_9_scaffold_56_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10887..11483)
DNA (597bp) protein (199aa)
ribK; CTP-dependent riboflavin kinase (EC:2.7.1.161)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-R
Riboflavin kinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNQ1_NATM8
sw_9_scaffold_56_15
unknown

Not on your lists

comp(11642..12007)
DNA (366bp) protein (122aa)

This feature has no annotations

sw_9_scaffold_56_16
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12096..13043)
DNA (948bp) protein (316aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
tRNA-modifying protein n=1 Tax=Halomicrobium katesii RepID=UPI0003608563
Wyosine base formation domain-containing protein
sw_9_scaffold_56_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13143..14612
DNA (1470bp) protein (490aa)
Aldehyde Dehydrogenase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ3_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHG04849.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
aldehyde dehydrogenase
sw_9_scaffold_56_18
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14857..16176
DNA (1320bp) protein (440aa)
Extracellular ligand-binding receptor n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ1_9EURY
ABC transporter {ECO:0000313|EMBL:AHG04851.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
livJ2; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
sw_9_scaffold_56_19
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16194..17075
DNA (882bp) protein (294aa)
Inner-membrane translocator n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ0_9EURY
ABC transporter permease {ECO:0000313|EMBL:AHG04852.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
livH; ABC-type branched-chain amino acid transport system, permease I
sw_9_scaffold_56_20
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17075..18127
DNA (1053bp) protein (351aa)
Inner-membrane translocator n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY9_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AHG04853.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source
livM2; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_9_scaffold_56_21
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18127..18936
DNA (810bp) protein (270aa)
Sulfate-transporting ATPase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY8_9EURY
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:AHG04854.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
livG2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_9_scaffold_56_22
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18933..19682
DNA (750bp) protein (250aa)
ABC transporter related protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY7_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHG04855.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacteriu
livF2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_9_scaffold_56_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


19776..21521
DNA (1746bp) protein (582aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:
Arginine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYR_NATPD
sw_9_scaffold_56_24
unknown

Not on your lists

comp(21522..21656)
DNA (135bp) protein (45aa)

This feature has no annotations

sw_9_scaffold_56_25
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21766..22605
DNA (840bp) protein (280aa)
Peptide chain release factor subunit 1 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5X6_HALJB
peptide chain release factor 1
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacte
sw_9_scaffold_56_26
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22665..23723
DNA (1059bp) protein (353aa)
l-threonine synthase (EC:4.2.3.1)
L-threonine synthase {ECO:0000313|EMBL:ADQ68240.1}; EC=4.2.3.1 {ECO:0000313|EMBL:ADQ68240.1};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricu
L-threonine synthase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTT5_HALBP
sw_9_scaffold_56_27
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23720..24223
DNA (504bp) protein (168aa)
NUDIX hydrolase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=L9UIS2_NATMM
NUDIX hydrolase {ECO:0000313|EMBL:ELY24048.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099 / DSM
NUDIX hydrolase
sw_9_scaffold_56_28
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24224..25492)
DNA (1269bp) protein (423aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tiaS; tRNAIle2(CAT)--2-agmatinylcytidine synthetase (EC:6.3.4.-)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HJB9_9EURY
sw_9_scaffold_56_29
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25603..26565
DNA (963bp) protein (321aa)
Putative HTH-type transcriptional regulatory protein Hmuk_0846 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0J5_HALMD
XRE family transcriptional regulator
Putative HTH-type transcriptional regulatory protein Hmuk_0846 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomic
sw_9_scaffold_56_30
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26566..27969)
DNA (1404bp) protein (468aa)
hypothetical protein id=24643023 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
WD40 repeat protein {ECO:0000313|EMBL:ERH12807.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
arylsulfotransferase
Displaying items 1-30 of 66 in total

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