ggKbase home page

sw_9_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_82_1
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)
transposase IS605 n=1 Tax=Halorubrum sp. T3 RepID=UPI00035CD8BF
transposase, IS605 OrfB family, central region
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:AGB38738.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronoc
sw_9_scaffold_82_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(277..1179)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INE6_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50357.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_9_scaffold_82_3
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1642..2766
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IFG9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR50362.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_9_scaffold_82_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3223..4698)
DNA (1476bp) protein (492aa)
Pantothenate permease n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JC67_HALVA
Pantothenate permease {ECO:0000313|EMBL:EMA06717.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 2
sodium:solute symporter
sw_9_scaffold_82_5
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4695..4961)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W786_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22065.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
Protein of unknown function (DUF3311)
sw_9_scaffold_82_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5178..6599
DNA (1422bp) protein (474aa)
dnaG; probable bacterial-type DNA primase DnaG (EC:2.7.7.-)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=268739 species="Archaea; Euryarch
DNA primase DnaG n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQW4_NATM8
sw_9_scaffold_82_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6576..7019)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EWS3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59397.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_9_scaffold_82_8
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7016..8359)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KHK1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA20646.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_9_scaffold_82_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8476..10098
DNA (1623bp) protein (541aa)
YyaL family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPV4_NATM8
YyaL family protein
YyaL family protein {ECO:0000313|EMBL:CCQ36051.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_9_scaffold_82_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10482..11288
DNA (807bp) protein (269aa)
TrmB family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR93_NATPD
hypothetical protein
TrmB family transcription regulator {ECO:0000313|EMBL:CAI49350.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
sw_9_scaffold_82_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11285..12208)
DNA (924bp) protein (308aa)
mptA; GTP cyclohydrolase I, archaeal-type (EC:3.5.4.-)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=268739 species="Archaea; Eurya
GTP cyclohydrolase MptA n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0Q0_NATM8
sw_9_scaffold_82_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12278..13090)
DNA (813bp) protein (271aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1210908 species="Archaea; Euryarchaeota;
Inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Halogranum salarium B-1 RepID=J3JFN2_9EURY
sw_9_scaffold_82_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13170..14258
DNA (1089bp) protein (363aa)
circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ACV47775.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ACV47775.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
circadian clock protein, KaiC n=1 Tax=Halomicrobium katesii RepID=UPI00035CC4B9
sw_9_scaffold_82_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14511..14834)
DNA (324bp) protein (108aa)
T-RNA-binding domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ96_9EURY
T-RNA-binding domain protein {ECO:0000313|EMBL:EFW90017.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihal
EMAP domain-containing protein
sw_9_scaffold_82_15
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14812..15354)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKT2_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB32145.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_9_scaffold_82_16
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15809..16507)
DNA (699bp) protein (233aa)
DNA repair and recombination protein RadB n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XAI3_9EURY
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350, ECO:0000313|EMBL:ELY57613.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natr
radB; DNA repair and recombination protein RadB
sw_9_scaffold_82_17
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16585..17334
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HFT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ82592.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
sw_9_scaffold_82_18
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17339..18664)
DNA (1326bp) protein (442aa)
UPF0272 protein HAH_2101 n=2 Tax=Haloarcula hispanica RepID=G0HW01_HALHT
hypothetical protein
UPF0272 protein HAH_2101 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (s
sw_9_scaffold_82_19
unknown

Not on your lists

18885..19889
DNA (1005bp) protein (335aa)

This feature has no annotations

sw_9_scaffold_82_20
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19990..22839)
DNA (2850bp) protein (950aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=662476 species="Archaea; Euryarchaeo
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K3K0_9EURY
sw_9_scaffold_82_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23082..25208
DNA (2127bp) protein (709aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
Catalase-peroxidase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZW4_HALMD
catalase/peroxidase HPI
sw_9_scaffold_82_22
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25305..25700)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CEX7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21810.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_9_scaffold_82_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25700..26140)
DNA (441bp) protein (147aa)
DUF2240 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISD2_NATPD
hypothetical protein
DUF2240 family protein {ECO:0000313|EMBL:CAI48955.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_9_scaffold_82_24
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26184..26714)
DNA (531bp) protein (177aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGY3_NATGS
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AFZ72350.1}; Histidine triad (HIT) protein {ECO:0000313|EMBL:ELY64265.1}; TaxID=797304 species="Archaea; Euryarchaeota; Hal
sw_9_scaffold_82_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26749..27450)
DNA (702bp) protein (234aa)
DnaJ N-terminal domain-containing protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJE2_9EURY
DnaJ N-terminal domain-containing protein {ECO:0000313|EMBL:ESP88039.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
ferredoxin
sw_9_scaffold_82_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27673..27906
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003798385
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47625.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_9_scaffold_82_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27982..28890)
DNA (909bp) protein (303aa)
map; methionyl aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {
Methionine aminopeptidase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ76_NATM8
sw_9_scaffold_82_28
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28983..29945
DNA (963bp) protein (321aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W9I4_9EURY
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KDE60295.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
2-hydroxyacid dehydrogenase
sw_9_scaffold_82_29
unknown

Not on your lists

30212..30484
DNA (273bp) protein (91aa)

This feature has no annotations

sw_9_scaffold_82_30
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30521..33544
DNA (3024bp) protein (1008aa)
FAD-linked oxidase domain protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HQI4_9EURY
FAD-linked oxidase domain protein {ECO:0000313|EMBL:ELZ85364.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii AT
FAD-linked oxidase domain protein
Displaying items 1-30 of 81 in total

View Taxonomy