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sw_9_scaffold_526

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_526_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..420
DNA (420bp) protein (140aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM37_NATPD
abc15r_1; ABC transporter
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_9_scaffold_526_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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423..1436
DNA (1014bp) protein (338aa)
Transcription regulator (Homolog to phosphate uptake regulator) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM38_NATPD
abc15r_2; ABC transporter
Transcription regulator (Homolog to phosphate uptake regulator) {ECO:0000313|EMBL:CAI50827.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
sw_9_scaffold_526_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1837..3813)
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZZ13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58268.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_9_scaffold_526_4
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3959..5998
DNA (2040bp) protein (680aa)
Bacterio-opsin activator n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BRR0_9EURY
Bacterio-opsin activator {ECO:0000313|EMBL:ELZ13691.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
PAS domain S-box
sw_9_scaffold_526_5
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5985..7676)
DNA (1692bp) protein (564aa)
Beta-carotene 15,15'-dioxygenase Blh {ECO:0000313|EMBL:CAP14571.1}; EC=1.13.11.63 {ECO:0000313|EMBL:CAP14571.1};; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Beta-carotene 15,15'-dioxygenase Blh n=1 Tax=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) RepID=B0R752_HALS3
blh; brp-like protein
sw_9_scaffold_526_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7796..8533)
DNA (738bp) protein (246aa)
Rhodopsin n=3 Tax=Haloarcula RepID=V5TJJ0_HALHI
rhodopsin
Rhodopsin {ECO:0000313|EMBL:AHB64865.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_9_scaffold_526_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8579..9091
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DPG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37375.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_9_scaffold_526_8
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9199..10386)
DNA (1188bp) protein (396aa)
Amino acid/amide ABC transporter membrane protein 2, haat family n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W994_9EURY
amino acid/amide ABC transporter membrane protein 2, haat family
Amino acid/amide ABC transporter membrane protein 2, haat family {ECO:0000313|EMBL:AGN01289.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.
sw_9_scaffold_526_9
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10569..11552)
DNA (984bp) protein (328aa)
Inner-membrane translocator n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7X5_9EURY
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AGN01288.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-B
sw_9_scaffold_526_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11549..12016)
DNA (468bp) protein (156aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK5_HALBP
amino acid/amide ABC transporter ATP-binding protein 2, haat family
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ADQ67057.1}; Amino acid/amide ABC transporter ATP-binding protein 2, haat family {ECO:0000313|EMBL:ELY29604.1}; Ta
sw_9_scaffold_526_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12910..14322)
DNA (1413bp) protein (471aa)
Branched-chain amino acid ABC transporter amino acid-binding protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VVQ8_9EURY
branched-chain amino acid ABC transporter amino acid-binding protein
Branched-chain amino acid ABC transporter amino acid-binding protein {ECO:0000313|EMBL:AGN01285.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarcha
sw_9_scaffold_526_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14491..15441)
DNA (951bp) protein (317aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLN0_NATM8
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CCQ38008.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
sw_9_scaffold_526_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15664..16623)
DNA (960bp) protein (320aa)
Alpha/beta hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N257_9EURY
Alpha/beta hydrolase {ECO:0000313|EMBL:EMA50795.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
alpha/beta hydrolase fold protein
sw_9_scaffold_526_14
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16663..17367)
DNA (705bp) protein (235aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E5H9_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELZ42172.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="
putative DNA binding protein
sw_9_scaffold_526_15
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17477..19048)
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003719DFD
Acyl-CoA synthetase {ECO:0000313|EMBL:ELZ42171.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 19288
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
sw_9_scaffold_526_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19360..20022
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU68_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ38032.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_526_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20075..20242)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITQ2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48481.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_9_scaffold_526_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20915..21118
DNA (204bp) protein (68aa)
PurE family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK42_NATM8
purE2; PurE family protein
PurE family protein {ECO:0000313|EMBL:CCQ35226.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_9_scaffold_526_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21146..21343
DNA (198bp) protein (66aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMW2_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ35227.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_9_scaffold_526_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21403..21663
DNA (261bp) protein (87aa)
UPF0213 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYN6_NATM8
UPF0213 family protein
UPF0213 family protein {ECO:0000313|EMBL:CCQ35228.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
sw_9_scaffold_526_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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21690..22136
DNA (447bp) protein (149aa)
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMN1_9EURY
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EMA46947.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
peroxiredoxin
sw_9_scaffold_526_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22350..22826)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU65_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48318.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_9_scaffold_526_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22867..23781)
DNA (915bp) protein (305aa)
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=268739 species="Archaea; Euryarch
Leucine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZ95_NATM8
Suspect SCG annotation. See neighboring gene [sw_9_scaffold_526_24].
sw_9_scaffold_526_24
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(23778..25613)
DNA (1836bp) protein (612aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:EMA61435.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1227
Leucyl-tRNA ligase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NY00_9EURY
leuS; leucyl-tRNA synthetase
sw_9_scaffold_526_25
unknown

Not on your lists

comp(25601..26299)
DNA (699bp) protein (233aa)

This feature has no annotations

sw_9_scaffold_526_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26553..27548)
DNA (996bp) protein (332aa)
arcB; ornithine cyclodeaminase (EC:4.3.1.12)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=348780 species="Archaea; Euryarchaeota; Ha
Alanine dehydrogenase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU68_NATPD
sw_9_scaffold_526_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27692..28105)
DNA (414bp) protein (138aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D361_9EURY
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:ELZ29122.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
flavin-nucleotide-binding protein
sw_9_scaffold_526_28
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28122..28802)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLM9_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ38003.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
Displaying 28 items

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