ggKbase home page

sw_9_scaffold_573

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_573_1
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(221..544)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K385_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39471.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_9_scaffold_573_2
unknown

Not on your lists

742..1239
DNA (498bp) protein (166aa)

This feature has no annotations

sw_9_scaffold_573_3
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1283..2434
DNA (1152bp) protein (384aa)
gluconolactonase (EC:3.1.1.17)
Gluconolactonase n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2A0T6_9PSED
Gluconolactonase {ECO:0000313|EMBL:ERI53520.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.
sw_9_scaffold_573_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2442..3269
DNA (828bp) protein (276aa)
polY1; DNA-directed DNA polymerase Y (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=268739 species="Archaea; Euryarchaeota; Halob
DNA polymerase IV n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSQ2_NATM8
sw_9_scaffold_573_5
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3266..3601
DNA (336bp) protein (112aa)
DNA polymerase IV {ECO:0000313|EMBL:AKH98033.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AKH98033.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarc
polY; DNA polymerase Y (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GTQ0_HALL2
sw_9_scaffold_573_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3585..4625)
DNA (1041bp) protein (347aa)
HTR-like protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VTR5_9EURY
HTR-like protein
HTR-like protein {ECO:0000313|EMBL:AGN00625.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_9_scaffold_573_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4628..4906
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QST7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92496.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_9_scaffold_573_8
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4970..5380
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UYR0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA14426.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_9_scaffold_573_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5419..7869
DNA (2451bp) protein (817aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRR1_NATPD
ATPase
DUF87 domain protein {ECO:0000313|EMBL:CAI49181.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strai
sw_9_scaffold_573_10
unknown

Not on your lists

7866..8489
DNA (624bp) protein (208aa)

This feature has no annotations

sw_9_scaffold_573_11
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8490..8705)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ12177.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
sw_9_scaffold_573_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8782..9447)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJN8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ56181.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_573_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9686..10222)
DNA (537bp) protein (179aa)
HTH domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRS8_NATPD
hypothetical protein
Cro/C1 family transcription regulator {ECO:0000313|EMBL:CAI49164.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_9_scaffold_573_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10263..10892)
DNA (630bp) protein (210aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-alcohol 1-archaetidyltransferase {ECO:0000313|EMBL:CAI49163.1}; EC=2.7.8.- {ECO:0000313|EMBL:CAI49163.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRS9_NATPD
sw_9_scaffold_573_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10889..11395)
DNA (507bp) protein (169aa)
Putative adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00039}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00039};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00039};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-R
Putative adenylate kinase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMV0_9EURY
AMP/CMP kinase AK6
sw_9_scaffold_573_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11392..12459)
DNA (1068bp) protein (356aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000255|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000255|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000255|HAMAP-Rule:MF_01023}; TaxID
Histidinol-phosphate aminotransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=HIS8_NATPD
sw_9_scaffold_573_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12550..13167
DNA (618bp) protein (206aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000255|HAMAP-Rule:MF_00316};; G
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=MOBA_NATPD
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A
sw_9_scaffold_573_18

Not on your lists

comp(13262..13528)
DNA (267bp) protein (89aa)
Rho termination factor, N-terminal domain protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZJK5_9ARCH
Rho termination factor, N-terminal domain protein {ECO:0000313|EMBL:ESS02475.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_9_scaffold_573_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13700..13960)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WAG3_9EURY
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ37474.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_9_scaffold_573_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14076..14780
DNA (705bp) protein (235aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MVF8_HALMO
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA48784.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus m
short-chain dehydrogenase/reductase SDR
sw_9_scaffold_573_21
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15054..15776)
DNA (723bp) protein (241aa)
Anaerobic dehydrogenase cluster protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AL40_NATGS
selenium-dependent hydroxylase accessory protein YqeC
Anaerobic dehydrogenase cluster protein {ECO:0000313|EMBL:ELY71566.1}; Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:AFZ73912.1}; TaxID=797304 species="Archaea; Eury
sw_9_scaffold_573_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15857..16315
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y460_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37315.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_573_23
unknown

Not on your lists

comp(16355..16555)
DNA (201bp) protein (67aa)

This feature has no annotations

sw_9_scaffold_573_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16555..16800)
DNA (246bp) protein (82aa)
hcpE_1; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC:5.3.3.- 4.1.1.68)
Fumarylacetoacetase family protein / GNAT family acetyltransferase {ECO:0000313|EMBL:CAI49158.2}; EC=2.3.1.- {ECO:0000313|EMBL:CAI49158.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria;
Fumarylacetoacetase family protein / GNAT family acetyltransferase n=2 Tax=Natronomonas pharaonis RepID=Q3IRT4_NATPD
sw_9_scaffold_573_25
unknown

Not on your lists

comp(17162..17302)
DNA (141bp) protein (47aa)

This feature has no annotations

sw_9_scaffold_573_26
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17384..17782)
DNA (399bp) protein (133aa)
RecA-superfamily ATPase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIM8_9EURY
conserved hypothetical protein containing circadian clock protein KaiC/DNA repair protein RadA domain
RecA-superfamily ATPase protein {ECO:0000313|EMBL:ERJ07006.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ34776.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
Displaying 26 items

View Taxonomy