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sw_9_scaffold_1397

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_1397_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..1354)
DNA (1353bp) protein (451aa)
MATE family drug/sodium antiporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUR6_9EURY
MATE family drug/sodium antiporter {ECO:0000313|EMBL:ELZ25624.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carl
putative efflux protein, MATE family
sw_9_scaffold_1397_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1567..2487
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IG49_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05367.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_9_scaffold_1397_3
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2532..3794
DNA (1263bp) protein (421aa)
IS1341-type transposase n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GUU8_HALL2
IS1341-type transposase {ECO:0000313|EMBL:ELZ75353.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lucentense (strain DSM
transposase (IS891/IS1136/IS1341/IS605)
sw_9_scaffold_1397_4
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3791..4642)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGH7_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ72926.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_9_scaffold_1397_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4675..4938)
DNA (264bp) protein (88aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZQ4_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ27374.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pa
3-hydroxyacyl-CoA dehydrogenase
sw_9_scaffold_1397_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4980..6074
DNA (1095bp) protein (365aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000313|EMBL:CCQ36372.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCQ36372.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
Histidine kinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQJ6_NATM8
sw_9_scaffold_1397_7
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6191..7456
DNA (1266bp) protein (422aa)
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I8H3_HALRX
alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase {ECO:0000313|EMBL:AGB15108.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax
sw_9_scaffold_1397_8
unknown

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7498..7605
DNA (108bp) protein (36aa)

This feature has no annotations

sw_9_scaffold_1397_9
unknown

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8098..8295
DNA (198bp) protein (66aa)

This feature has no annotations

sw_9_scaffold_1397_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8559..9134
DNA (576bp) protein (192aa)
Transcription initiation factor IIB n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1I8_NATM8
tfbA1; transcription initiation factor TFB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
Displaying 10 items

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