ggKbase home page

sw_9_scaffold_1219

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_1219_1
unknown

Not on your lists

comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

sw_9_scaffold_1219_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(145..756)
DNA (612bp) protein (204aa)
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK51_9EURY
Formimidoyltetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:EMA46057.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
formimidoyltetrahydrofolate cyclodeaminase
sw_9_scaffold_1219_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

956..1240
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42480.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_1219_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1337..1972
DNA (636bp) protein (212aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU3_9EURY
sw_9_scaffold_1219_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2091..3038
DNA (948bp) protein (316aa)
Adk/cmk cluster protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDU2_9EURY
Adk/cmk cluster protein {ECO:0000313|EMBL:EMA55264.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
adk/cmk cluster protein
sw_9_scaffold_1219_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3114..3689
DNA (576bp) protein (192aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9L0_9EURY
sw_9_scaffold_1219_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3689..4561
DNA (873bp) protein (291aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBB5_9EURY
H/ACA RNA-protein complex component Cbf5p rbh
sw_9_scaffold_1219_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4558..5463)
DNA (906bp) protein (302aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDL1_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA42475.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
mscS; mechanosensitive ion channel
sw_9_scaffold_1219_trna_1
unknown

Not on your lists

5587..5659
DNA (73bp)
transferRNA
sw_9_scaffold_1219_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6054..8081
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42474.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_1219_10
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8358..9281)
DNA (924bp) protein (308aa)
hypothetical protein id=24653070 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Pyruvate formate-lyase activating-like protein {ECO:0000313|EMBL:ERH13575.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
radical SAM domain-containing protein
sw_9_scaffold_1219_11
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9478..10071)
DNA (594bp) protein (198aa)
Type 11 methyltransferase/S-adenosylmethionine-dependent methyltransferase 3-like protein 1 n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NTV6_9EURY
Type 11 methyltransferase/S-adenosylmethionine-dependent methyltransferase 3-like protein 1 {ECO:0000313|EMBL:EMA60998.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
SAM-dependent methyltransferase
sw_9_scaffold_1219_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10327..11409
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9K5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42472.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_1219_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12324..13244
DNA (921bp) protein (307aa)
Transposase, IS605 OrfB family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9V0_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA54737.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus t
transposase
sw_9_scaffold_1219_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13324..14166)
DNA (843bp) protein (281aa)
Polyprenyl synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBL4_9EURY
Polyprenyl synthetase {ECO:0000313|EMBL:EMA55256.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
polyprenyl synthetase
sw_9_scaffold_1219_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14286..14609
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54518.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_1219_16
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14625..14942
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PCT9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA67957.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
sw_9_scaffold_1219_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14948..15850)
DNA (903bp) protein (301aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M169_9EURY
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:EMA39537.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
electron transfer flavoprotein subunit alpha
sw_9_scaffold_1219_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15847..16668)
DNA (822bp) protein (274aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCT0_9EURY
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EMA42469.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
etfB; electron transfer flavoprotein beta subunit
sw_9_scaffold_1219_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16686..17867)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55253.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_1219_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17987..19300
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9K0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42467.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_1219_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19391..19825
DNA (435bp) protein (145aa)
Flagellin domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9P0_9EURY
Flagellin domain-containing protein {ECO:0000313|EMBL:EMA42466.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
hypothetical protein
sw_9_scaffold_1219_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20090..20662)
DNA (573bp) protein (191aa)
menG; ubiquinone/menaquinone biosynthesis methyltransferase (EC:2.1.1.-)
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEX5_9EURY
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:EMA55250.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
sw_9_scaffold_1219_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20972..21298
DNA (327bp) protein (109aa)
atpG; vacuolar (H+)-ATPase G subunit (EC:3.6.3.14)
ATP synthase H subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDT1_9EURY
ATP synthase H subunit {ECO:0000313|EMBL:EMA55249.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
sw_9_scaffold_1219_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21291..23648
DNA (2358bp) protein (786aa)
Archaeal/vacuolar-type h+-ATPase subunit i n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCE5_9EURY
Archaeal/vacuolar-type h+-ATPase subunit i {ECO:0000313|EMBL:EMA55248.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
archaeal/vacuolar-type h+-ATPase subunit i
sw_9_scaffold_1219_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23814..24077
DNA (264bp) protein (88aa)
A-type ATP synthase subunit K n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9J5_9EURY
A-type ATP synthase subunit K {ECO:0000313|EMBL:EMA42462.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
ATP synthase subunit K
sw_9_scaffold_1219_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24101..24682
DNA (582bp) protein (194aa)
V-type proton ATPase subunit E n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBK3_9EURY
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
V-type ATP synthase subunit E
sw_9_scaffold_1219_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24679..25698
DNA (1020bp) protein (340aa)
ntpC; V-type ATP synthase subunit C (EC:3.6.3.14)
V-type ATP synthase subunit C n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEX0_9EURY
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
sw_9_scaffold_1219_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25695..26021
DNA (327bp) protein (109aa)
atpF; V-type ATP synthase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDS7_9EURY
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
sw_9_scaffold_1219_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26028..27785
DNA (1758bp) protein (586aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1227456 species="Archaea;
V-type ATP synthase alpha chain n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCE1_9EURY
ATP synthase subunit alpha
Displaying items 1-30 of 39 in total

View Taxonomy