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sw_9_scaffold_1350

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_1350_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..1004
DNA (1002bp) protein (334aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N151_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA50834.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
sw_9_scaffold_1350_2
unknown

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1106..1855
DNA (750bp) protein (250aa)

This feature has no annotations

sw_9_scaffold_1350_trna_1
unknown

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1880..1988
DNA (109bp)
transferRNA
sw_9_scaffold_1350_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2162..2356
DNA (195bp) protein (65aa)
Cold-shock DNA-binding domain-containing protein n=2 Tax=Halococcus RepID=M0MQV7_HALMO
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EMA48102.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
cold-shock DNA-binding domain-containing protein
sw_9_scaffold_1350_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2485..2955
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAS0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42438.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical membrane protein (DUF422)
sw_9_scaffold_1350_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3276..3560
DNA (285bp) protein (95aa)
DNA binding protein putative transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ93_9EURY
DNA binding protein putative transcriptional regulator {ECO:0000313|EMBL:EMA45777.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
TetR family transcriptional regulator
sw_9_scaffold_1350_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3605..4966)
DNA (1362bp) protein (454aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZW4_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EMA50838.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
phr_2; deoxyribodipyrimidine photolyase
sw_9_scaffold_1350_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5006..6997)
DNA (1992bp) protein (664aa)
PrkA cluster protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N156_9EURY
PrkA cluster protein {ECO:0000313|EMBL:EMA50839.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
stage V sporulation protein R-like protein
sw_9_scaffold_1350_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6990..8261)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2A2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50840.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_1350_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8263..10302)
DNA (2040bp) protein (680aa)
Kinase anchor protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ97_9EURY
Kinase anchor protein {ECO:0000313|EMBL:EMA45782.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
prkA; kinase anchor protein
sw_9_scaffold_1350_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10281..10559)
DNA (279bp) protein (93aa)
Kinase anchor protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ97_9EURY
Kinase anchor protein {ECO:0000313|EMBL:EMA45782.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
putative Ser protein kinase
sw_9_scaffold_1350_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10559..11305)
DNA (747bp) protein (249aa)
Serine protein kinase, PrkA n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK70_9EURY
Serine protein kinase, PrkA {ECO:0000313|EMBL:EMA45783.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
serine protein kinase PrkA
sw_9_scaffold_1350_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11302..12516)
DNA (1215bp) protein (405aa)
Serine protein kinase, PrkA n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK70_9EURY
Serine protein kinase, PrkA {ECO:0000313|EMBL:EMA45783.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
prkA-type serine/threonine protein kinase
sw_9_scaffold_1350_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12840..13226
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45784.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_1350_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13318..13659)
DNA (342bp) protein (114aa)
Ferredoxin I 5 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZW8_9EURY
Ferredoxin I 5 {ECO:0000313|EMBL:EMA50843.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ferA_5; ferredoxin I 5
sw_9_scaffold_1350_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13783..14232
DNA (450bp) protein (150aa)
UPF0179 protein C450_14257 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N160_9EURY
UPF0179 protein C450_14257 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
hypothetical protein
sw_9_scaffold_1350_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14335..15165)
DNA (831bp) protein (277aa)
succinylglutamate desuccinylase (EC:3.1.-.-)
Succinylglutamate desuccinylase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1U0_9EURY
Succinylglutamate desuccinylase {ECO:0000313|EMBL:EMA51922.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailand
sw_9_scaffold_1350_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15335..15814)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50848.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_1350_trna_2
unknown

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15921..16004
DNA (84bp)
transferRNA
sw_9_scaffold_1350_18
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(16407..17354)
DNA (948bp) protein (316aa)
Putative homoserine kinase type II n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QG63_9EURY
Putative homoserine kinase type II {ECO:0000313|EMBL:EGQ43284.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
sw_9_scaffold_1350_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17536..18678
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N165_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50849.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
conserved hypothetical membrane protein (DUF63)
Displaying 21 items

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