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sw_9_scaffold_1595

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_1595_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..267)
DNA (267bp) protein (89aa)
NMD3 family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAN4_9EURY
NMD3 family protein {ECO:0000313|EMBL:EMA42811.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
NMD3 family protein
sw_9_scaffold_1595_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

380..1291
DNA (912bp) protein (304aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
htpX1; heat shock protein HtpX (EC:3.4.24.-)
Protease HtpX homolog n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCL9_9EURY
sw_9_scaffold_1595_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1692..2291
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42809.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_1595_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2411..3445
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=2 Tax=Halococcus saccharolyticus RepID=M0MBT6_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
DNA repair and recombination protein RadA
sw_9_scaffold_1595_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3679..4098)
DNA (420bp) protein (140aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAJ1_9EURY
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EMA42807.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
SUF system FeS assembly protein, NifU family
sw_9_scaffold_1595_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4154..5401)
DNA (1248bp) protein (416aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
Cysteine desulfurase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT4_9EURY
cysteine desulfurase, SufS subfamily protein
sw_9_scaffold_1595_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5467..5613)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42802.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_1595_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5754..6038
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAM4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42801.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_1595_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6047..6340)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42800.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_1595_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6321..7169)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55330.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
TPR repeat-containing protein
sw_9_scaffold_1595_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7223..7774
DNA (552bp) protein (184aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY
2'-5' RNA ligase
sw_9_scaffold_1595_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8263..8415
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCN7_9EURY
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
rpl39e; 50S ribosomal protein L39e
sw_9_scaffold_1595_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8412..8690
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF2_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
ribosomal protein L31E
sw_9_scaffold_1595_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8692..9357
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF65_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
translation initiation factor eIF-6
sw_9_scaffold_1595_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9467..9940
DNA (474bp) protein (158aa)
Prefoldin subunit alpha n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBU4_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
prefoldin subunit alpha
sw_9_scaffold_1595_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9950..11266
DNA (1317bp) protein (439aa)
Signal recognition particle receptor FtsY n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBI4_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobac
signal recognition particle-docking protein ftsy
sw_9_scaffold_1595_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11326..11916
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9A5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54153.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_9_scaffold_1595_18
unknown

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11961..12110
DNA (150bp) protein (50aa)

This feature has no annotations

sw_9_scaffold_1595_19
unknown

Not on your lists

12161..12271
DNA (111bp) protein (37aa)

This feature has no annotations

sw_9_scaffold_1595_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12288..12785
DNA (498bp) protein (166aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCP2_9EURY
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA55338.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
putative membrane-bound metal-dependent hydrolase
sw_9_scaffold_1595_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


12908..14311
DNA (1404bp) protein (468aa)
Signal recognition particle 54 kDa protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE7_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
signal recognition particle subunit ffh/srp54 (srp54)
sw_9_scaffold_1595_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14580..15107
DNA (528bp) protein (176aa)
Mg2+ transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBR4_9EURY
Mg2+ transporter {ECO:0000313|EMBL:EMA42788.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
divalent cation transporter domain-containing protein
sw_9_scaffold_1595_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15108..15665
DNA (558bp) protein (186aa)
Divalent cation transporter/divalent cation transporter subunit II, MgtE family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAH0_9EURY
Divalent cation transporter/divalent cation transporter subunit II, MgtE family protein {ECO:0000313|EMBL:EMA42787.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
divalent cation transporter
sw_9_scaffold_1595_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15799..16242
DNA (444bp) protein (148aa)
Micrococcal nuclease-like nuclease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAK8_9EURY
Micrococcal nuclease-like nuclease {ECO:0000313|EMBL:EMA42786.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
nuclease-like protein
sw_9_scaffold_1595_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16246..16707
DNA (462bp) protein (154aa)
Micrococcal nuclease-like nuclease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAK8_9EURY
Micrococcal nuclease-like nuclease {ECO:0000313|EMBL:EMA42786.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
comA; endonuclease
Displaying 25 items

View Taxonomy