ggKbase home page

sw_9_scaffold_2133

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_2133_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..749)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5T2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52474.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_2133_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(742..1125)
DNA (384bp) protein (128aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=1227455 species="Archaea; Eu
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIG3_9EURY
phosphoribosyl-AMP cyclohydrolase
sw_9_scaffold_2133_trna_1
unknown

Not on your lists

comp(1968..2039)
DNA (72bp)
transferRNA
sw_9_scaffold_2133_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2145..2441
DNA (297bp) protein (99aa)
Helicase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFL4_9EURY
Helicase {ECO:0000313|EMBL:EMA44497.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
helicase
sw_9_scaffold_2133_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2438..2803)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGP3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44498.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
CopG family protein
sw_9_scaffold_2133_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2903..3496)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIG6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44499.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_2133_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3496..4773)
DNA (1278bp) protein (426aa)
Replication factor A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7J5_9EURY
Replication factor A {ECO:0000313|EMBL:EMA53508.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
OB-fold tRNA/helicase-type nucleic acid binding-protein
sw_9_scaffold_2133_7
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4862..5410)
DNA (549bp) protein (183aa)
Acetyltransferase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HHN5_9EURY
Acetyltransferase {ECO:0000313|EMBL:ELZ82599.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
hat2; acetyltransferase
sw_9_scaffold_2133_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5932..6393)
DNA (462bp) protein (154aa)
Deoxyribonuclease/rho domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFM0_9EURY
Deoxyribonuclease/rho domain-containing protein {ECO:0000313|EMBL:EMA44502.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
TRAM domain protein
sw_9_scaffold_2133_9
unknown

Not on your lists

6520..6678
DNA (159bp) protein (53aa)

This feature has no annotations

sw_9_scaffold_2133_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6693..6968)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LT59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36747.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_9_scaffold_2133_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7076..8842)
DNA (1767bp) protein (589aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=1227456 species="Archaea; Euryarchaeota
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NA35_9EURY
sw_9_scaffold_2133_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9042..9770
DNA (729bp) protein (243aa)
transposase ISH9 n=1 Tax=Halomicrobium katesii RepID=UPI0003818E86
ISH9-type transposase ISHwa3
ISH9-type transposase ISHwa3 {ECO:0000313|EMBL:CCC39336.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (s
Displaying 13 items

View Taxonomy