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sw_9_scaffold_257

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_257_1
unknown

Not on your lists

comp(2..229)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_9_scaffold_257_2

Not on your lists

comp(272..2563)
DNA (2292bp) protein (764aa)
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferases of PMT family n=1 Tax=uncultured archaeon A07HR60 RepID=V5ABD3_9ARCH
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferases of PMT family {ECO:0000313|EMBL:ESS13045.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A
hypothetical protein
sw_9_scaffold_257_3
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2560..2904)
DNA (345bp) protein (115aa)
ABC transporter-related protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YZB5_9EURY
ABC transporter-related protein {ECO:0000313|EMBL:ELY78273.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 375
ABC transporter-related protein
sw_9_scaffold_257_4
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2901..3347)
DNA (447bp) protein (149aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:AEH38318.1}; EC=3.6.3.30 {ECO:0000313|EMBL:AEH38318.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger
Fe(3+)-transporting ATPase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DB35_HALXS
sw_9_scaffold_257_5
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3440..3745)
DNA (306bp) protein (102aa)
ABC transporter-related protein {ECO:0000313|EMBL:ELY73696.1}; ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:AGB32560.1}; TaxID=797303 species="Archaea; Euryarcha
sw_9_scaffold_257_6
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3735..5342)
DNA (1608bp) protein (536aa)
ABC-type iron(III) transport system, permease protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R5J0_HALMT
sfuB; ABC-type iron(III) transport system, permease protein
ABC-type iron(III) transport system, permease protein {ECO:0000313|EMBL:AFK19500.1}; Iron ABC transporter permease {ECO:0000313|EMBL:AHZ21158.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobact
sw_9_scaffold_257_7
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5344..6636)
DNA (1293bp) protein (431aa)
Putative iron-III ABC transporter periplasmic substrate-binding protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GE49_9EURY
Putative iron-III ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:ELZ70536.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
iron ABC transporter substrate-binding protein
sw_9_scaffold_257_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6694..7860)
DNA (1167bp) protein (389aa)
Alpha-1,4-glucan-protein synthase, UDP-forming n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYP2_9EURY
Alpha-1,4-glucan-protein synthase, UDP-forming {ECO:0000313|EMBL:EMA50433.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
Reversibly glycosylated polypeptide
sw_9_scaffold_257_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8148..9659)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N022_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50434.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_257_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9678..12158)
DNA (2481bp) protein (827aa)
Putative cell surface protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6T6_9EURY
Putative cell surface protein {ECO:0000313|EMBL:EMA41108.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
FG-GAP repeat-containing protein, possibly sugar-related
sw_9_scaffold_257_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12342..13046)
DNA (705bp) protein (235aa)
SOUL heme-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXW3_9EURY
SOUL heme-binding protein {ECO:0000313|EMBL:EMA50436.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
SOUL heme-binding protein
sw_9_scaffold_257_12
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13043..14014)
DNA (972bp) protein (324aa)
mRNA 3'-end processing factor n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWR2_9EURY
mRNA 3'-end processing factor {ECO:0000313|EMBL:ELY53919.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
hypothetical protein
sw_9_scaffold_257_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14064..15839)
DNA (1776bp) protein (592aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ81_9EURY
ligB; DNA ligase (ATP)
sw_9_scaffold_257_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16061..16558
DNA (498bp) protein (166aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCR9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA54465.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
sw_9_scaffold_257_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16686..17429
DNA (744bp) protein (248aa)
dehydrogenase/reductase 2 (EC:1.1.1.-)
3-oxoacyl-ACP reductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUA6_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EMA36753.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_9_scaffold_257_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17431..19032
DNA (1602bp) protein (534aa)
Acetyl-CoA carboxylase alpha subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKW0_9EURY
Acetyl-CoA carboxylase alpha subunit {ECO:0000313|EMBL:EMA45379.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
carboxyl transferase
sw_9_scaffold_257_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19078..20235
DNA (1158bp) protein (386aa)
Acetyl-CoA acetyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLQ4_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA45380.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
acetyl-CoA acetyltransferase
sw_9_scaffold_257_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20232..20654
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI55_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45381.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_257_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20714..21445)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N185_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50440.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_257_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21569..21730
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXW9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50441.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_257_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21775..22323
DNA (549bp) protein (183aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8N1_9EURY
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:EMA40964.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sodium/calcium exchanger membrane region
sw_9_scaffold_257_22
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22334..22813
DNA (480bp) protein (160aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDU5_HALXS
sodium/calcium exchanger membrane region
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:AEH39199.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduen
sw_9_scaffold_257_23
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22958..23503)
DNA (546bp) protein (182aa)
Asn family transcriptional regulator n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IN17_9EURY
Asn family transcriptional regulator {ECO:0000313|EMBL:ELZ98110.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum AT
trh3; Asn family transcriptional regulator
sw_9_scaffold_257_24
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23700..24122
DNA (423bp) protein (141aa)
TrkA-N domain-containing protein n=3 Tax=Haloferax RepID=L5NXS3_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:ELZ92215.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus
trkA8; TrkA-N domain protein
sw_9_scaffold_257_25
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24119..26239
DNA (2121bp) protein (707aa)
Transporter n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IMT3_9EURY
Transporter {ECO:0000313|EMBL:ELZ98111.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
cat4; transport protein (probable substrate cationic amino acids)
sw_9_scaffold_257_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26400..26993)
DNA (594bp) protein (198aa)
Ferritin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKW4_9EURY
Ferritin {ECO:0000313|EMBL:EMA45384.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
Ferritin Dps family protein
sw_9_scaffold_257_27
unknown

Not on your lists

comp(26986..27144)
DNA (159bp) protein (53aa)

This feature has no annotations

sw_9_scaffold_257_28
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27202..27375
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49606.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_9_scaffold_257_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27414..27887
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50443.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_257_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


27953..28678
DNA (726bp) protein (242aa)
Alanyl-tRNA synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N031_9EURY
Alanyl-tRNA synthetase {ECO:0000313|EMBL:EMA50444.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
threonyl/alanyl tRNA synthetase, SAD
Displaying items 1-30 of 44 in total

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