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sw_9_scaffold_345

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_345_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..186
DNA (186bp) protein (62aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUL3_9EURY
sw_9_scaffold_345_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(165..1178)
DNA (1014bp) protein (338aa)
HdaI-type histone deacetylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUA5_9EURY
HdaI-type histone deacetylase {ECO:0000313|EMBL:EMA49322.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
hdal; HdaI-type histone deacetylase
sw_9_scaffold_345_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1175..1618)
DNA (444bp) protein (148aa)
Histone n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVG0_9EURY
Histone {ECO:0000313|EMBL:EMA49323.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
transcription factor CBF/NF-Y/histone domain protein
sw_9_scaffold_345_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1800..2702)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBY3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54599.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_9_scaffold_345_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2969..4123)
DNA (1155bp) protein (385aa)
Replication factor A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEM9_9EURY
Replication factor A {ECO:0000313|EMBL:EMA44181.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
OB-fold tRNA/helicase-type nucleic acid binding protein
sw_9_scaffold_345_6
unknown

Not on your lists

4771..4980
DNA (210bp) protein (70aa)

This feature has no annotations

sw_9_scaffold_345_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5045..5758)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUL8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49326.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_345_trna_1
unknown

Not on your lists

5854..5926
DNA (73bp)
transferRNA
sw_9_scaffold_345_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6029..6643)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49329.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_9_scaffold_345_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6750..7370
DNA (621bp) protein (207aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY31_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EMA49330.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
glyoxalase/bleomycin resistance protein/dioxygenase
sw_9_scaffold_345_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7422..7868)
DNA (447bp) protein (149aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEI9_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA44177.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
MaoC domain-containing protein dehydratase
sw_9_scaffold_345_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8055..8582
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEM3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44176.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_345_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8652..9269
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVH0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49333.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_345_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9293..10048)
DNA (756bp) protein (252aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHK0_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA44174.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
NAD-dependent epimerase/dehydratase
sw_9_scaffold_345_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10185..10793)
DNA (609bp) protein (203aa)
Translation initiation factor IF-2 subunit beta n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFM1_9EURY
Translation initiation factor IF-2 subunit beta {ECO:0000313|EMBL:EMA44173.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor IF2/IF5
sw_9_scaffold_345_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11121..11498
DNA (378bp) protein (126aa)
Dihydroneopterin aldolase {ECO:0000256|HAMAP-Rule:MF_02130}; Short=DHNA {ECO:0000256|HAMAP-Rule:MF_02130};; EC=4.1.2.25 {ECO:0000256|HAMAP-Rule:MF_02130};; 7,8-dihydroneopterin aldolase {ECO:0000256|H
Dihydroneopterin aldolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEI4_9EURY
hypothetical protein
sw_9_scaffold_345_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11509..11814)
DNA (306bp) protein (102aa)
Nucleotide pyrophosphohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVH6_9EURY
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:EMA49338.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
nucleotide pyrophosphohydrolase
sw_9_scaffold_345_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11970..12428
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWY0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49339.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_345_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12429..13175)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY42_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49340.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_345_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13347..13664
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7P9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53896.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_9_scaffold_345_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13661..15598)
DNA (1938bp) protein (646aa)
Xenobiotic-transporting ATPase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUC5_9EURY
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:EMA49342.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
multidrug ABC transporter ATPase/permease
sw_9_scaffold_345_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15708..16226)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44162.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_345_trna_2
unknown

Not on your lists

16308..16381
DNA (74bp)
transferRNA
sw_9_scaffold_345_22
unknown

Not on your lists

comp(16555..16644)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_9_scaffold_345_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16743..16862
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZV1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49945.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_345_trna_3
unknown

Not on your lists

16911..16984
DNA (74bp)
transferRNA
sw_9_scaffold_345_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17186..17878
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDJ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43403.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_345_25
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18478..19338
DNA (861bp) protein (287aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1227488 species=
NH(3)-dependent NAD(+) synthetase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CC20_9EURY
NH(3)-dependent NAD(+) synthetase
sw_9_scaffold_345_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19541..20149
DNA (609bp) protein (203aa)
DNA-directed RNA polymerase epsilon subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG53_9EURY
DNA-directed RNA polymerase epsilon subunit {ECO:0000313|EMBL:EMA43400.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
DNA-directed RNA polymerase epsilon subunit
sw_9_scaffold_345_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20251..21285
DNA (1035bp) protein (345aa)
ABC transporter periplasmic protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFC9_9EURY
ABC transporter periplasmic protein {ECO:0000313|EMBL:EMA43399.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
ABC transporter substrate-binding protein
Displaying 30 items

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