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sw_9_scaffold_183

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_183_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..283
DNA (282bp) protein (94aa)
Transcription elongation factor NusA-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLF2_HALJP
transcription elongation factor NusA
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
sw_9_scaffold_183_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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326..754
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J905_HALJB
rps12P; 30S ribosomal protein S12P
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogr
sw_9_scaffold_183_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


756..1361
DNA (606bp) protein (202aa)
30S ribosomal protein S7 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NVM7_HALUD
30S ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;"
sw_9_scaffold_183_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1463..2059
DNA (597bp) protein (199aa)
dethiobiotin synthase n=1 Tax=Halomicrobium katesii RepID=UPI0003724DB6
BioY protein {ECO:0000313|EMBL:ELZ59099.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
BioY protein
sw_9_scaffold_183_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2056..2760
DNA (705bp) protein (235aa)
Cobalt ABC transporter ATP-binding protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KYI3_9EURY
Cobalt transport ATP-binding protein {ECO:0000313|EMBL:EMA10999.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vall
ABC transporter ATP-binding protein
sw_9_scaffold_183_6
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2754..3458
DNA (705bp) protein (235aa)
Cobalt transporter n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WRK6_9EURY
Cobalt transporter {ECO:0000313|EMBL:ELY52119.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus
cobalt transporter
sw_9_scaffold_183_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3455..4204)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22421.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_183_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4268..5242)
DNA (975bp) protein (325aa)
GHMP kinase ATP-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUN6_9EURY
GHMP kinase ATP-binding protein {ECO:0000313|EMBL:EMA21371.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyt
GHMP kinase
sw_9_scaffold_183_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5295..6794)
DNA (1500bp) protein (500aa)
Replication factor C large subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ93_9EURY
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256
ATPase AAA
sw_9_scaffold_183_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7038..7742
DNA (705bp) protein (235aa)
transcriptional regulator n=1 Tax=Halomicrobium katesii RepID=UPI0003753A7E
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV47858.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
sw_9_scaffold_183_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7774..9111)
DNA (1338bp) protein (446aa)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:ERH09127.1}; EC=2.3.3.10 {ECO:0000313|EMBL:ERH09127.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="ha
hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
hydroxymethylglutaryl-CoA synthase id=24647999 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
sw_9_scaffold_183_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9221..9799)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P429_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47851.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_9_scaffold_183_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9882..10721)
DNA (840bp) protein (280aa)
TatD-related DNAse n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNC9_9EURY
TatD-related DNAse
TatD-related DNAse {ECO:0000313|EMBL:CCQ34603.1}; TatD-related deoxyribonuclease protein {ECO:0000313|EMBL:ERJ05080.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
sw_9_scaffold_183_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10755..11213)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4H1_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47993.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_9_scaffold_183_15
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11265..11588)
DNA (324bp) protein (108aa)
tRNA-binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y300_9EURY
tRNA-binding protein {ECO:0000313|EMBL:ELY68036.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
EMAP domain-containing protein
sw_9_scaffold_183_16
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11739..12011
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YT97_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51967.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
ArsR family transcriptional regulator
sw_9_scaffold_183_17
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12008..12775
DNA (768bp) protein (256aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 5 (EC:3.1.2.6)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K6G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA16972.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_9_scaffold_183_18
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12864..14228
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H8Y6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ80202.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
sw_9_scaffold_183_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14337..15563
DNA (1227bp) protein (409aa)
Phosphoglycerate kinase {ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|RuleBase:RU000532};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PFE4_9EURY
sw_9_scaffold_183_20
unknown

Not on your lists

15563..15958
DNA (396bp) protein (132aa)

This feature has no annotations

sw_9_scaffold_183_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15955..16725)
DNA (771bp) protein (257aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating) (EC:1.2.1.59) id=24648410 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559,
gap; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating) (EC:1.2.1.59)
Displaying 21 items

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