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sw_9_scaffold_1873

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_1873_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..499
DNA (498bp) protein (166aa)
Major facilitator superfamily transporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1M4_9EURY
Major facilitator superfamily transporter {ECO:0000313|EMBL:EMA50580.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
MFS transporter
sw_9_scaffold_1873_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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830..1066
DNA (237bp) protein (79aa)
Transcription regulator/DNA-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JR77_HALVA
transcriptional regulator
Transcription regulator/DNA-binding protein {ECO:0000313|EMBL:EMA23390.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
sw_9_scaffold_1873_3
unknown

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1093..1326
DNA (234bp) protein (78aa)

This feature has no annotations

sw_9_scaffold_1873_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1334..1534
DNA (201bp) protein (67aa)
Elongation factor 1-alpha n=1 Tax=halophilic archaeon J07HX64 RepID=U1QQI4_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
translation elongation factor 1A (EF-1A/EF-Tu)
sw_9_scaffold_1873_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1531..2496
DNA (966bp) protein (322aa)
tef1A; translation elongation factor EF-1 subunit alpha (EC:3.6.5.3)
Elongation factor 1-alpha n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LPH2_HALJP
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_9_scaffold_1873_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2498..2806
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Halogranum salarium B-1 RepID=J3A2E0_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogr
rps10p; 30S ribosomal protein S10
sw_9_scaffold_1873_trna_1
unknown

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2857..2928
DNA (72bp)
transferRNA
sw_9_scaffold_1873_7
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3165..4067)
DNA (903bp) protein (301aa)
Putative permease, DMT superfamily n=1 Tax=Halonotius sp. J07HN4 RepID=U1P9P7_9EURY
Putative permease, DMT superfamily {ECO:0000313|EMBL:ERH06734.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN
hypothetical protein
sw_9_scaffold_1873_8
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4124..4744)
DNA (621bp) protein (207aa)
DNA binding protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ANS3_NATA1
DNA binding protein {ECO:0000313|EMBL:ELZ00386.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 700177 /
boa8; bacterio-opsin activator
sw_9_scaffold_1873_9
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4741..5385)
DNA (645bp) protein (215aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:ELZ00387.1}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:ELZ00387.1};; IGP synth
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0APX9_NATA1
imidazole glycerol phosphate synthase subunit hisH
sw_9_scaffold_1873_10
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5523..6152
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LXD6_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM59127.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_9_scaffold_1873_11
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6145..6693
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LXD5_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM59126.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_9_scaffold_1873_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6879..7319)
DNA (441bp) protein (147aa)
NifU-like protein/SUF system FeS assembly protein, NifU family n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2H8_9EURY
NifU-like protein/SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ELZ29726.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex
FeS assembly protein SufA
sw_9_scaffold_1873_trna_2
unknown

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7426..7500
DNA (75bp)
transferRNA
sw_9_scaffold_1873_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7551..8618)
DNA (1068bp) protein (356aa)
Methionine synthase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L831_HALJP
Methionine synthase {ECO:0000313|EMBL:EMA29767.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
methionine synthase
sw_9_scaffold_1873_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8615..9616)
DNA (1002bp) protein (334aa)
Methionine synthase vitamin-B12 independent n=2 Tax=Haloarcula RepID=Q5V590_HALMA
Cobalamin-independent synthase MetE domain-containing protein
Cobalamin-independent synthase MetE domain protein {ECO:0000313|EMBL:ACV48774.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
sw_9_scaffold_1873_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9765..10148)
DNA (384bp) protein (128aa)
Methylase {ECO:0000313|EMBL:CCQ32515.1}; Protoporphyrinogen oxidase protein {ECO:0000313|EMBL:ERJ05568.1}; EC=2.1.1.144 {ECO:0000313|EMBL:ERJ05568.1};; TaxID=1033806 species="Archaea; Euryarchaeota; H
Methylase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH96_9EURY
prmC; methylase
Displaying 17 items

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