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sw_9_scaffold_258

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_258_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..124
DNA (123bp) protein (41aa)
DICT domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP37_NATPD
hypothetical protein
DICT domain protein {ECO:0000313|EMBL:CAI50115.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_9_scaffold_258_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(281..1324)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PKQ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG92786.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_9_scaffold_258_3
unknown

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1532..1813
DNA (282bp) protein (94aa)

This feature has no annotations

sw_9_scaffold_258_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1788..2939)
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6G4_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA39960.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
acyl-CoA dehydrogenase
sw_9_scaffold_258_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3049..3273)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LK75_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33458.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_9_scaffold_258_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3347..3982
DNA (636bp) protein (212aa)
PyrE-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY14_9EURY
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
orotate phosphoribosyltransferase-like protein
sw_9_scaffold_258_7
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3960..4667)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M500_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39704.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_9_scaffold_258_8
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4664..5824)
DNA (1161bp) protein (387aa)
ABC transporter related n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NVB9_HALUD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKH96777.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaer
ABC transporter
sw_9_scaffold_258_9
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5821..6648)
DNA (828bp) protein (276aa)
ABC-type transport system permease protein (Probable substrate sulfate/thiosulfate/molybdate) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP95_NATPD
ABC transporter permease {ECO:0000313|EMBL:AKH96778.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum s
abc13p; sulfate ABC transporter permease
sw_9_scaffold_258_10
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6645..7580)
DNA (936bp) protein (312aa)
ABC-type molybdate transport system, periplasmic component n=1 Tax=Natronococcus occultus SP4 RepID=L0JZ71_9EURY
Sulfate/thiosulfate/molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKH96779.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
ABC-type molybdate transport system, periplasmic component
sw_9_scaffold_258_11

Not on your lists

7640..8065
DNA (426bp) protein (142aa)
DNA-binding protein, Tfx family n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZS41_9ARCH
DNA-binding protein, Tfx family {ECO:0000313|EMBL:ESS05560.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
tfx; putative transcriptional regulator
sw_9_scaffold_258_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8256..9743
DNA (1488bp) protein (496aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=485914 species="Archaea; Eur
cysteinyl-tRNA synthetase n=1 Tax=Halomicrobium katesii RepID=UPI000374755D
sw_9_scaffold_258_13
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9768..12392)
DNA (2625bp) protein (875aa)
Htr-like protein n=2 Tax=Halobacterium salinarum RepID=O51970_HALSA
Htr-like protein {ECO:0000313|EMBL:AAG20731.1}; Uncharacterized protein {ECO:0000313|EMBL:AAC82814.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
signal-transducing histidine kinase / response regulator
sw_9_scaffold_258_14
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12487..13053
DNA (567bp) protein (189aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227495 species="A
2'-5' RNA ligase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z0K1_9EURY
2'-5' RNA ligase
sw_9_scaffold_258_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13244..14074
DNA (831bp) protein (277aa)
Metal transporter family GufA protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4M3_9EURY
Metal transporter family GufA protein {ECO:0000313|EMBL:ELZ29632.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
transporter
sw_9_scaffold_258_16
unknown

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comp(14071..14352)
DNA (282bp) protein (94aa)

This feature has no annotations

sw_9_scaffold_258_17
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14477..14629
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YTS3_9EURY
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
50S ribosomal protein L39e
sw_9_scaffold_258_18
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14626..14904
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LK83_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410, ECO:0000313|EMBL:EMA34007.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sourc
ribosomal protein L31E
sw_9_scaffold_258_19
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14907..15464
DNA (558bp) protein (186aa)
Translation initiation factor 6 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CL59_9EURY
translation initiation factor 6 (aeIF-6)
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbac
sw_9_scaffold_258_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15465..15824)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4E6_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37396.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_258_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15944..16777)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZS9_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46837.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_9_scaffold_258_22
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16768..17310)
DNA (543bp) protein (181aa)
hypothetical protein; K09150 hypothetical protein id=24655255 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG88758.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
conserved hypothetical protein (DUF460)
Displaying 22 items

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