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sw_9_scaffold_3259

Search features with annotation key words

Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_3259_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..314)
DNA (312bp) protein (104aa)
Histone deacetylase superfamily n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYN6_HALMD
histone deacetylase superfamily protein
Histone deacetylase superfamily {ECO:0000313|EMBL:ACV46697.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_9_scaffold_3259_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(311..751)
DNA (441bp) protein (147aa)
Histone-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D347_9EURY
Histone-like protein {ECO:0000313|EMBL:ELZ29870.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM
transcription factor CBF/NF-Y/histone domain protein
sw_9_scaffold_3259_3
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(796..2271)
DNA (1476bp) protein (492aa)
Replication factor A n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KWY6_9EURY
replication protein A
Replication factor A {ECO:0000313|EMBL:EMA25378.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 135
sw_9_scaffold_3259_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2889..3485)
DNA (597bp) protein (199aa)
hypothetical protein id=24649661 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10745.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_3259_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3486..4055
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SWB6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_9_scaffold_3259_trna_1
unknown

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3649..3721
DNA (73bp)
transferRNA
sw_9_scaffold_3259_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4192..5562
DNA (1371bp) protein (457aa)
D-hydantoinase {ECO:0000313|EMBL:AJR18778.1}; EC=3.5.2.2 {ECO:0000313|EMBL:AJR18778.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Noc
D-hydantoinase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K2X5_CLOPA
amidohydrolase
sw_9_scaffold_3259_7
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6016..6327)
DNA (312bp) protein (104aa)
N-carbamoyl-L-amino acid amidohydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HGT0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01226.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_9_scaffold_3259_8
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6379..7299)
DNA (921bp) protein (307aa)
N-carbamoyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:ADE01792.1}; EC=3.5.1.- {ECO:0000313|EMBL:ADE01792.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
N-carbamoyl-L-amino acid amidohydrolase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQX2_HALVD
amaB2; N-carbamoyl-L-amino acid amidohydrolase
sw_9_scaffold_3259_9
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7388..8284)
DNA (897bp) protein (299aa)
galE; nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LD32_HALJP
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA30354.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
sw_9_scaffold_3259_10
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8241..9875)
DNA (1635bp) protein (545aa)
UvrABC system protein C n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JX68_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=662476 species="Ar
uvrC; excinuclease ABC subunit C
sw_9_scaffold_3259_11
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9931..10413)
DNA (483bp) protein (161aa)
adhC; zinc-binding dehydrogenase / S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
Zinc-binding dehydrogenase / S-(Hydroxymethyl)glutathione dehydrogenase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9X9_HALMT
Alcohol dehydrogenase {ECO:0000313|EMBL:AHZ24100.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain ATCC
Displaying 12 items

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