ggKbase home page

sw_9_scaffold_341

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_341_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..378
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPB8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA22778.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_9_scaffold_341_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

514..2898
DNA (2385bp) protein (795aa)
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQF7_9EURY
OB-fold tRNA/helicase-type nucleic acid binding-protein
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ELZ25471.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimp
sw_9_scaffold_341_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2959..4614
DNA (1656bp) protein (552aa)
histone acetyltransferase (EC:2.3.1.48)
Histone acetyltransferase, ELP3 family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWU5_HALMD
Histone acetyltransferase {ECO:0000313|EMBL:ELZ25475.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
sw_9_scaffold_341_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4661..4906)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK48_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45763.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_9_scaffold_341_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4971..5495)
DNA (525bp) protein (175aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=M0JU46_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA11903.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_9_scaffold_341_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5521..8511
DNA (2991bp) protein (997aa)
DNA helicase protein {ECO:0000313|EMBL:ERJ05013.1}; EC=3.6.4.12 {ECO:0000313|EMBL:ERJ05013.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhab
DNA helicase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DXW4_9EURY
DNA replication factor Dna2 rbh
sw_9_scaffold_341_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8554..9720
DNA (1167bp) protein (389aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
FO synthase subunit 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4F5_9EURY
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
sw_9_scaffold_341_8
unknown

Not on your lists

9812..9907
DNA (96bp) protein (32aa)

This feature has no annotations

sw_9_scaffold_341_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9897..10292
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LJP6_HALWC
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CCC40980.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM
sw_9_scaffold_341_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10202..11716)
DNA (1515bp) protein (505aa)
Radical SAM domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P367_HALMD
FO synthase subunit 2
Radical SAM domain protein {ECO:0000313|EMBL:ACV47539.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
sw_9_scaffold_341_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11821..12849
DNA (1029bp) protein (343aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000313|EMBL:ELZ29590.1}; EC=6.3.2.6 {ECO:0000313|EMBL:ELZ29590.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacte
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2C7_9EURY
phosphoribosylaminoimidazole-succinocarboxamide synthase
sw_9_scaffold_341_12
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12908..13159
DNA (252bp) protein (84aa)
Phosphoribosylformylglycinamidine synthase, purS protein {ECO:0000313|EMBL:AKH98423.1}; EC=6.3.5.3 {ECO:0000313|EMBL:AKH98423.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobact
Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGU6_NATGS
phosphoribosylformylglycinamidine synthase subunit PurS
sw_9_scaffold_341_13
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13156..13836
DNA (681bp) protein (227aa)
phosphoribosylformylglycinamidine synthase subunit i (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=24618850 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formyl
purQ; phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
sw_9_scaffold_341_14
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14078..15154)
DNA (1077bp) protein (359aa)
Radical SAM domain-containing protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KGR7_9EURY
Radical SAM domain-containing protein {ECO:0000313|EMBL:EMA19374.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula am
Elongator protein 3/MiaB/NifB
sw_9_scaffold_341_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15192..16949)
DNA (1758bp) protein (586aa)
archaeosine tRNA-ribosyltransferase type 2 (EC:2.4.2.-)
tRNA-guanine transglycosylase, various specificities n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R016_9EURY
tRNA-guanine transglycosylase, various specificities {ECO:0000313|EMBL:EFW89910.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sourc
sw_9_scaffold_341_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17058..18527)
DNA (1470bp) protein (490aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tRNA-guanine(15) transglycosylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC71_9EURY
7-cyano-7-deazaguanine tRNA-ribosyltransferase
sw_9_scaffold_341_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18524..19096)
DNA (573bp) protein (191aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] id=24649558 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:ERH10649.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
NUDIX hydrolase
sw_9_scaffold_341_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19173..20123)
DNA (951bp) protein (317aa)
Probable cell surface glycoprotein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRX9_NATM8
probable cell surface glycoprotein
Probable cell surface glycoprotein {ECO:0000313|EMBL:CCQ37009.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mo
sw_9_scaffold_341_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20292..21014
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3C2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37008.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_341_trna_1
unknown

Not on your lists

comp(21112..21184)
DNA (73bp)
transferRNA
sw_9_scaffold_341_20
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21230..21313)
DNA (84bp) protein (28aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrial
Displaying 21 items

View Taxonomy