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sw_9_scaffold_391

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_391_1
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(40..297)
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V2D0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA16247.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_9_scaffold_391_2
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(315..977)
DNA (663bp) protein (221aa)
Tax=BJP_IG2102_BRC1_58_13
sw_9_scaffold_391_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1085..1900
DNA (816bp) protein (272aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W070_9EURY
sw_9_scaffold_391_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1903..2370
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQC1_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12847.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_9_scaffold_391_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2428..2763)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IVN4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA00796.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_9_scaffold_391_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2849..3688
DNA (840bp) protein (280aa)
Protein-export membrane protein SecF n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2E0_9EURY
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
preprotein translocase subunit SecF
sw_9_scaffold_391_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3685..5262
DNA (1578bp) protein (526aa)
Protein-export membrane protein SecD n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2K7_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
secD; protein-export membrane protein SecD
sw_9_scaffold_391_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5259..5894)
DNA (636bp) protein (212aa)
ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=1033806 species="Archaea; Euryarchaeota; H
Ribonuclease HII n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E1L2_9EURY
sw_9_scaffold_391_9
unknown

Not on your lists

comp(5933..6121)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_9_scaffold_391_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6145..7434)
DNA (1290bp) protein (430aa)
pseudouridylate synthase; K07583 tRNA pseudouridine synthase 10 [EC:5.4.99.-] id=24649013 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1085028
pseudouridylate synthase
sw_9_scaffold_391_11
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7519..8499)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WIY6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY49445.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
sw_9_scaffold_391_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8633..9826
DNA (1194bp) protein (398aa)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK95_9EURY
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:ELZ23710.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimpl
nucleotidyl transferase
sw_9_scaffold_391_13
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9826..11616
DNA (1791bp) protein (597aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
glmS2; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KZX7_9EURY
sw_9_scaffold_391_14
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11625..12011
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HVV0_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26403.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_9_scaffold_391_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12028..12708)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HFX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89003.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_9_scaffold_391_16
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(12776..13594)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QCI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EGQ39985.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
hypothetical protein
sw_9_scaffold_391_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13716..14702
DNA (987bp) protein (329aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=48
Mevalonate kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ21_HALMD
mevalonate kinase
sw_9_scaffold_391_18
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14699..15478
DNA (780bp) protein (260aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1227452 species="Archaea; Euryarchaeota; H
Isopentenyl phosphate kinase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KJQ8_9EURY
aspartate/glutamate/uridylate kinase
sw_9_scaffold_391_19
unknown

Not on your lists

15535..16254
DNA (720bp) protein (240aa)

This feature has no annotations

sw_9_scaffold_391_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16527..17873
DNA (1347bp) protein (449aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=797114 species="Archaea; Euryarchaeota; Halobac
Beta-lactamase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT69_9EURY
hydrolase
Displaying 20 items

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