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sw_9_scaffold_409

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_409_1
unknown

Not on your lists

comp(2..91)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_9_scaffold_409_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

162..935
DNA (774bp) protein (258aa)
Periplasmic binding protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0A4_HALMD
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ACV48896.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Ha
sw_9_scaffold_409_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1039..1554
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHH2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60994.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_9_scaffold_409_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1582..2022)
DNA (441bp) protein (147aa)
Transcriptional regulator, AsnC family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3J7_HALMD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV47669.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrob
sw_9_scaffold_409_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2125..3171
DNA (1047bp) protein (349aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L583_HALJP
sw_9_scaffold_409_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3395..3925)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU39_NATM8
hypothetical protein
PIN domain protein {ECO:0000313|EMBL:CCQ37976.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_9_scaffold_409_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3915..4163)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y5X9_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37975.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_409_8
unknown

Not on your lists

4215..4361
DNA (147bp) protein (49aa)

This feature has no annotations

sw_9_scaffold_409_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4358..5152
DNA (795bp) protein (265aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1D9_HALMD
ribosomal RNA methyltransferase RrmJ/FtsJ
sw_9_scaffold_409_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5220..6161)
DNA (942bp) protein (314aa)
menB; naphthoate synthase (EC:4.1.3.36); K01661 naphthoate synthase [EC:4.1.3.36] id=24647150 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1085028 spec
menB; naphthoate synthase (EC:4.1.3.36)
sw_9_scaffold_409_11
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6297..7667
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9VWP2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY41605.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
sw_9_scaffold_409_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7811..8398
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V2A5_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA16274.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_9_scaffold_409_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8398..9111
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLL2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22774.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_409_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9099..10061
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036ADD7C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48251.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
sw_9_scaffold_409_15
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10054..10497
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KZE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA26687.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_9_scaffold_409_16
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10490..11245
DNA (756bp) protein (252aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V2A2_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA26688.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_9_scaffold_409_17
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11179..12975)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K8V7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA16280.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_9_scaffold_409_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13004..13507
DNA (504bp) protein (168aa)
30S ribosomal protein S15 n=2 Tax=Halomicrobium RepID=C7NWN7_HALMD
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_9_scaffold_409_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13651..14784
DNA (1134bp) protein (378aa)
RecJ-like exonuclease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHK4_9EURY
RecJ-like exonuclease {ECO:0000313|EMBL:ELZ22780.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
recJ3; RecJ-like exonuclease
sw_9_scaffold_409_20
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14781..15086
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EA71_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ43938.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_9_scaffold_409_21
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


15083..15703
DNA (621bp) protein (207aa)
30S ribosomal protein S3Ae n=2 Tax=Haloarcula RepID=M0KB26_HALAR
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1230451 species="Archaea; Euryarchaeota; Hal
30S ribosomal protein S3
sw_9_scaffold_409_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15841..17115
DNA (1275bp) protein (425aa)
PBS lyase HEAT domain-containing protein repeat-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHS4_9EURY
PBS lyase HEAT domain-containing protein repeat-containing protein {ECO:0000313|EMBL:ELZ22786.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosim
PBS lyase HEAT domain-containing protein repeat-containing protein
sw_9_scaffold_409_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17280..17579
DNA (300bp) protein (100aa)
PRC-barrel domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY38_HALMD
PRC-barrel domain-containing protein
PRC-barrel domain protein {ECO:0000313|EMBL:ACV48498.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohatae
Displaying 23 items

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