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sw_9_scaffold_418

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_418_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

sw_9_scaffold_418_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(326..1411)
DNA (1086bp) protein (362aa)
Putative beta-'-dioxygenase Blh protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DYM4_9EURY
Putative beta-'-dioxygenase Blh protein {ECO:0000313|EMBL:ERJ05268.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdu
beta-carotene 15,15'-monooxygenase (Brp)-like protein
sw_9_scaffold_418_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1402..2130)
DNA (729bp) protein (243aa)
crtY; lycopene cyclase (EC:1.14.-.-)
Lycopene cyclase domain-containing protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HMV1_9EURY
Lycopene cyclase domain-containing protein {ECO:0000313|EMBL:ESP89259.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source
sw_9_scaffold_418_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2390..2803
DNA (414bp) protein (138aa)
UspA domain protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PA36_9EURY
UspA domain protein {ECO:0000313|EMBL:EMA66718.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
UspA domain protein
sw_9_scaffold_418_5

Not on your lists

2803..2937
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVL4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS02612.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
UspA domain protein
sw_9_scaffold_418_6

Not on your lists

comp(3043..4422)
DNA (1380bp) protein (460aa)
Amino acid transporter n=1 Tax=uncultured archaeon A07HR60 RepID=V4YHK5_9ARCH
Amino acid transporter {ECO:0000313|EMBL:ESS10802.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
amino acid transporter
sw_9_scaffold_418_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4603..6000)
DNA (1398bp) protein (466aa)
amino acid transport protein id=24645712 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Amino acid transporter {ECO:0000313|EMBL:ERH09931.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
amino acid transporter
sw_9_scaffold_418_8

Not on your lists

comp(6112..6867)
DNA (756bp) protein (252aa)
Transcriptional regulator, AsnC family n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZJW6_9ARCH
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ESS02610.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
AsnC family transcriptional regulator rbh
sw_9_scaffold_418_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6974..8830
DNA (1857bp) protein (619aa)
TrkA-N domain protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DSA9_9EURY
Potassium transporter {ECO:0000313|EMBL:KDS91262.2}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
TrkA-N domain protein
sw_9_scaffold_418_10
unknown

Not on your lists

8832..9029
DNA (198bp) protein (66aa)

This feature has no annotations

sw_9_scaffold_418_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9201..11147
DNA (1947bp) protein (649aa)
hypothetical protein id=24655587 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89026.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_9_scaffold_418_12

Not on your lists

comp(11166..11576)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YCR5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS10771.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_9_scaffold_418_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11674..12162)
DNA (489bp) protein (163aa)
Uncharacterized protein id=24649862 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10940.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_9_scaffold_418_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12198..12407)
DNA (210bp) protein (70aa)
Uncharacterized protein id=24649860 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10938.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_9_scaffold_418_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12576..13436)
DNA (861bp) protein (287aa)
hop; halorhodopsin; K04642 halorhodopsin id=24646773 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Bacteriorhodopsin {ECO:0000313|EMBL:ERH10937.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hop; halorhodopsin
sw_9_scaffold_418_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13620..14207)
DNA (588bp) protein (196aa)
Uncharacterized protein id=24646772 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10936.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_9_scaffold_418_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14381..15544)
DNA (1164bp) protein (388aa)
Aspartate aminotransferase {ECO:0000313|EMBL:EMA32855.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EMA32855.1};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
Aspartate aminotransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLG2_HALJP
aspartate aminotransferase
sw_9_scaffold_418_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15541..15957)
DNA (417bp) protein (139aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Natronomonas pharaonis RepID=Q3INK6_NATPD
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
sw_9_scaffold_418_19
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16051..17067)
DNA (1017bp) protein (339aa)
Hypotheical protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YFW2_9EURY
Hypotheical protein {ECO:0000313|EMBL:GAD53051.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sw_9_scaffold_418_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17138..17965
DNA (828bp) protein (276aa)
Dolichyl-phosphate-mannose-proteinmannosyltransf erase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4K4_HALMD
dolichyl-phosphate-mannose-protein mannosyltransferase
Dolichyl-phosphate-mannose-proteinmannosyltransf erase {ECO:0000313|EMBL:ACV48026.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" so
sw_9_scaffold_418_21
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18000..19145
DNA (1146bp) protein (382aa)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K3K9_9EURY
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
phosphoribosylaminoimidazole carboxylase
sw_9_scaffold_418_22
unknown

Not on your lists

comp(19173..19358)
DNA (186bp) protein (62aa)

This feature has no annotations

sw_9_scaffold_418_23
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19514..20149
DNA (636bp) protein (212aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929};; 5-(carboxyam
Phosphoribosylaminoimidazole carboxylase, catalytic subunit n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTQ4_HALUD
phosphoribosylaminoimidazole carboxylase, catalytic subunit
sw_9_scaffold_418_24
unknown

Not on your lists

20160..20936
DNA (777bp) protein (259aa)

This feature has no annotations

sw_9_scaffold_418_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21015..22670
DNA (1656bp) protein (552aa)
Rhomboid family protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYQ6_HALMD
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ACV48595.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
sw_9_scaffold_418_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22698..23360)
DNA (663bp) protein (221aa)
Putative RNA methylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPU7_9EURY
Putative RNA methylase {ECO:0000313|EMBL:ELZ24412.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
RNA methyltransferase
sw_9_scaffold_418_27
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23429..23632)
DNA (204bp) protein (68aa)
Methyltransferase type 11 n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PDF4_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA66870.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 135
methylase involved in ubiquinone/menaquinone biosynthesis
Displaying 27 items

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