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sw_9_scaffold_378_16

Organism: SW_9_Halobacteriales_67_25

near complete RP 28 / 55 MC: 6 BSCG 24 / 51 MC: 3 ASCG 33 / 38 MC: 2
Location: comp(10363..11469)

Top 3 Functional Annotations

Value Algorithm Source
NMD3 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ48_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 372.0
  • Bit_score: 517
  • Evalue 1.10e-143
nonsense mediated mRNA decay-like protein similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 372.0
  • Bit_score: 517
  • Evalue 3.20e-144
NMD3 family protein {ECO:0000313|EMBL:ERJ06848.1}; Nonsense mediated mRNA decay-like protein {ECO:0000313|EMBL:CCQ33013.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 372.0
  • Bit_score: 517
  • Evalue 1.60e-143

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Taxonomy

Halorhabdus tiamatea → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1107
ATGAGCAGGTCAGGGGAGTTCTGCCCGCGCTGTGGGGACCCCATCGAGCGCCCGGGGTCGCTGCCGGCGCCCGGGGGACCCGACAGCGGGCTCTGTAACGAGTGCTACCTCGCGGCCTACGACCTCGTGGACGCGCCCGACCGCGTCGAGGTGCGTGTCTGTCGCCAGTGCGGTGCGATCCAGCGGGGCAACCGGTGGGCCGACGTCGGCGCCGAGGACTACACCGACGTCGCCATCGAGGAGACCACGGCGGCGCTGGGCGTCCACGTCGACGCGGCGAGTGTCTCCTGGCATGTCAAACCGGAACAGGTCGACGAGACCACCGTCCGGATGCACTGTACCTTCTCGGGAGTGTTGCGGGGCACGCCGGTCACCGAGGAGGCGACCGTCCCGGTGAAGATCGGCCGCGGGACCTGTGATCGGTGTGGGCGCATCGCGGGGGGCGCCTACGCCAGCGTCGTCCAGGTGCGCGGCCGTGACCGCCGGCCCGCCGACGCGGAGCGGTCACGCGCCGAGGCCATCGCACGGGAGGTTGTCGCGGACCTGGAGGCGGACGGCGACCGCGACGCCTTCGTCTCGGAGGTCTCCGACCGCCCGGAGGGGCTCGACCTCAAACTCTCGACGACCAAACTCGGGGACCAGGTAGCCCGACAGATCGCGACCGAACTCGGGGGCACGGTCTCGGAGTCGGAGACGCTCGTCACCGAGGACGGCGACGGCAACGAGGTCTACCGCGTGACCTACGCCGTCCGCCTGCCGCCGTACCGGCCGGGCGAGGTCATCGACCCCGGGGACGGCGACGGGCCGGTGCTCGTCCGGAGCCTCAGTGGCAGCCTCACGGGAACGCGGGTACGCTCGGGCGAGCCCTACCGGGCCCCACTCGGCGAGGACGCACCCGAGGCGGACAGCCTGGGCTTCTACGGGGACGCACGGCAGACGACCCTCGTCGCCGTCGAGGACGACCACGCTGTCCAGGTGCTCGACCCGGAGACCTACGAGGCACGGACGGTCGCCCGGCCCGCGTACCTCGACCCCGACGCTGCCGAAGTACCGGTCCTGAAGAGCCGTGCGGGTCTGTACGTCCTCCCCGAGGAGGGGCCCGGATGA
PROTEIN sequence
Length: 369
MSRSGEFCPRCGDPIERPGSLPAPGGPDSGLCNECYLAAYDLVDAPDRVEVRVCRQCGAIQRGNRWADVGAEDYTDVAIEETTAALGVHVDAASVSWHVKPEQVDETTVRMHCTFSGVLRGTPVTEEATVPVKIGRGTCDRCGRIAGGAYASVVQVRGRDRRPADAERSRAEAIAREVVADLEADGDRDAFVSEVSDRPEGLDLKLSTTKLGDQVARQIATELGGTVSESETLVTEDGDGNEVYRVTYAVRLPPYRPGEVIDPGDGDGPVLVRSLSGSLTGTRVRSGEPYRAPLGEDAPEADSLGFYGDARQTTLVAVEDDHAVQVLDPETYEARTVARPAYLDPDAAEVPVLKSRAGLYVLPEEGPG*