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sw_9_scaffold_378

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_378_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..467)
DNA (465bp) protein (155aa)
TATA-box-binding protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZU4_HALMD
TATA-box binding family protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
sw_9_scaffold_378_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

669..1634
DNA (966bp) protein (322aa)
N2-methylguanosine tRNA methyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QS26_9EURY
N2-methylguanosine tRNA methyltransferase {ECO:0000313|EMBL:ERH08522.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
RNA methylase
sw_9_scaffold_378_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1673..2455
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYQ2_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27542.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
short-chain dehydrogenase
sw_9_scaffold_378_4
unknown

Not on your lists

comp(2468..2677)
DNA (210bp) protein (70aa)

This feature has no annotations

sw_9_scaffold_378_5
unknown

Not on your lists

comp(2674..2853)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_9_scaffold_378_6
unknown

Not on your lists

comp(2940..3029)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_9_scaffold_378_7
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3081..3692)
DNA (612bp) protein (204aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P765_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EMA65668.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
glyoxalase/bleomycin resistance protein/dioxygenase
sw_9_scaffold_378_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4023..4382
DNA (360bp) protein (120aa)
Rhomboid family protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P394_9EURY
Rhomboid family protein {ECO:0000313|EMBL:EMA63295.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_9_scaffold_378_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4367..5377)
DNA (1011bp) protein (337aa)
hypothetical protein id=24648121 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09248.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_378_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5496..7562
DNA (2067bp) protein (689aa)
hypothetical protein id=24650161 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Beta propeller domain protein {ECO:0000313|EMBL:ERH11243.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_378_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7638..7811
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Halorhabdus RepID=U2E3I9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11199.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_9_scaffold_378_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7799..8500)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5UYL3_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA14380.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_9_scaffold_378_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8500..9444)
DNA (945bp) protein (315aa)
NmrA family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ03_9EURY
NmrA family protein {ECO:0000313|EMBL:ELZ27657.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
NmrA family protein
sw_9_scaffold_378_14
unknown

Not on your lists

comp(9516..9725)
DNA (210bp) protein (70aa)

This feature has no annotations

sw_9_scaffold_378_15
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9833..10036
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HB67 RepID=U1QZH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH11392.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_9_scaffold_378_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10363..11469)
DNA (1107bp) protein (369aa)
NMD3 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ48_9EURY
nonsense mediated mRNA decay-like protein
NMD3 family protein {ECO:0000313|EMBL:ERJ06848.1}; Nonsense mediated mRNA decay-like protein {ECO:0000313|EMBL:CCQ33013.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_9_scaffold_378_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11555..12211
DNA (657bp) protein (219aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M828_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EMA41503.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_9_scaffold_378_18
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12272..12709
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8S0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA17218.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_9_scaffold_378_19
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12710..13066)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1PCU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89911.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_9_scaffold_378_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13067..13507)
DNA (441bp) protein (147aa)
hypothetical protein id=24645283 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09500.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_378_21
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13602..13973
DNA (372bp) protein (124aa)
30S ribosomal protein S8e n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL98_HALJP
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
rps8E; 30S ribosomal protein S8
sw_9_scaffold_378_22
unknown

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comp(14008..14160)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 22 items

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