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sw_9_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_144_1
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..925
DNA (924bp) protein (308aa)
TRAP transporter solute receptor, TAXI family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FAA0_9EURY
TRAP transporter solute receptor, TAXI family protein {ECO:0000313|EMBL:ELZ56177.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H
TRAP transporter solute receptor, TAXI family
sw_9_scaffold_144_2
unknown

Not on your lists

1059..1802
DNA (744bp) protein (248aa)

This feature has no annotations

sw_9_scaffold_144_3
unknown

Not on your lists

comp(1620..2045)
DNA (426bp) protein (142aa)

This feature has no annotations

sw_9_scaffold_144_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2297..3109
DNA (813bp) protein (271aa)
TRAP transporter 4TM/12TM fusion protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FA18_9EURY
TRAP transporter 4TM/12TM fusion protein {ECO:0000313|EMBL:ELZ56178.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hoc
TRAP transporter 4TM/12TM fusion protein
sw_9_scaffold_144_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3106..3339
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FC27_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ56179.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_144_6
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3515..6145
DNA (2631bp) protein (877aa)
ATPase AAA n=1 Tax=Halorubrum sp. T3 RepID=UPI00037D0EE8
DNA replication factor Dna2 {ECO:0000313|EMBL:ELZ33720.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense D
DNA replication factor Dna2
sw_9_scaffold_144_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6281..6757)
DNA (477bp) protein (159aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=12
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FAA5_9EURY
phosphoribosylaminoimidazole-succinocarboxamide synthase
sw_9_scaffold_144_8
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6739..7326)
DNA (588bp) protein (196aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=12
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FAA5_9EURY
phosphoribosylaminoimidazole-succinocarboxamide synthase
sw_9_scaffold_144_9
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7495..8184
DNA (690bp) protein (230aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FA23_9EURY
tRNA 2'-O-methylase rbh
sw_9_scaffold_144_10
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8328..8423
DNA (96bp) protein (32aa)
Histidine kinase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DE24_9EURY
Histidine kinase {ECO:0000313|EMBL:ELZ33725.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
sw_9_scaffold_144_11
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8567..9532)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DE00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33726.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein rbh
sw_9_scaffold_144_12
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9752..10276
DNA (525bp) protein (175aa)
Transcription factor E n=2 Tax=Halorubrum RepID=M0DG73_9EURY
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
transcription factor TFIIE, subunit alpha
sw_9_scaffold_144_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10276..10971
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DFZ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33728.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_144_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10986..11765
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FC35_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ56189.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_144_15
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11875..12585
DNA (711bp) protein (237aa)
Molybdopterin binding domain protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DE28_9EURY
Molybdopterin binding domain protein {ECO:0000313|EMBL:ELZ33730.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenqu
molybdopterin binding domain protein
sw_9_scaffold_144_16
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12607..12720)
DNA (114bp) protein (38aa)
Uncharacterized protein n=7 Tax=Halorubrum RepID=M0DCY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ57061.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 1011
sw_9_scaffold_144_17
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13115..14251
DNA (1137bp) protein (379aa)
ATP-NAD/AcoX kinase n=2 Tax=Halorubrum RepID=M0NMT8_9EURY
ATP-NAD/AcoX kinase {ECO:0000313|EMBL:EMA58479.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
ATP-NAD/AcoX kinase rbh
sw_9_scaffold_144_18
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14307..14897
DNA (591bp) protein (197aa)
Transferase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FA32_9EURY
Transferase {ECO:0000313|EMBL:ELZ56193.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
transferase
sw_9_scaffold_144_19
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14898..15758)
DNA (861bp) protein (287aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
Ribose-phosphate pyrophosphokinase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FC40_9EURY
sw_9_scaffold_144_20
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15914..16570
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DG83_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33737.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_144_21
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17283..17513)
DNA (231bp) protein (77aa)
UPF0391 membrane protein Hlac_2089 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LR13_HALLT
UPF0391 membrane protein FK85_08510 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sacchar
hypothetical protein
sw_9_scaffold_144_22
unknown

Not on your lists

comp(17552..17890)
DNA (339bp) protein (113aa)

This feature has no annotations

sw_9_scaffold_144_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17987..19645
DNA (1659bp) protein (553aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F8C5_9EURY
Gamma-glutamyltransferase {ECO:0000313|EMBL:ELZ56200.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7
sw_9_scaffold_144_24
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19874..21265
DNA (1392bp) protein (464aa)
Branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 1 n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EDJ0_9EURY
Branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 1 {ECO:0000313|EMBL:ELZ45861.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacal
branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 1
sw_9_scaffold_144_25
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21593..22423)
DNA (831bp) protein (277aa)
ABC transporter {ECO:0000313|EMBL:CDK40096.1}; EC=3.6.3.17 {ECO:0000313|EMBL:CDK40096.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
ABC transporter n=1 Tax=Halorubrum sp. AJ67 RepID=V6DW57_9EURY
ABC transporter rbh
sw_9_scaffold_144_26
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22420..23367)
DNA (948bp) protein (316aa)
ABC transporter n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FA39_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ56203.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
ABC transporter rbh
sw_9_scaffold_144_27
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23360..24685)
DNA (1326bp) protein (442aa)
Inner-membrane translocator n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DE42_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:ELZ33745.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense D
inner-membrane translocator rbh
sw_9_scaffold_144_28
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24682..25803)
DNA (1122bp) protein (374aa)
Inner-membrane translocator n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F8D0_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:ELZ56205.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC
inner-membrane translocator
sw_9_scaffold_144_29
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25965..26663)
DNA (699bp) protein (233aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Lipoyl synthase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DW62_9EURY
lipoyl synthase
sw_9_scaffold_144_30
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26689..26865)
DNA (177bp) protein (59aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Lipoyl synthase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DW62_9EURY
lipoyl synthase
Displaying items 1-30 of 42 in total

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