ggKbase home page

sw_9_scaffold_164

Search features with annotation key words

Displaying items 1-30 of 43 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_164_1
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..460
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000366F380
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509, ECO:0000313|EMBL:EMA61668.1}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|H
rfc; replication factor C small subunit
sw_9_scaffold_164_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

699..1232
DNA (534bp) protein (178aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
Phosphodiesterase, MJ0936 family protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DRR1_9EURY
phosphodiesterase, MJ0936 family
sw_9_scaffold_164_3
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1645..1773
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P5R0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA65158.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_9_scaffold_164_4
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1773..2948
DNA (1176bp) protein (392aa)
Phosphate transporter n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DPR1_9EURY
Phosphate transporter {ECO:0000313|EMBL:ELZ36833.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 142
phosphate transporter rbh
sw_9_scaffold_164_5
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3254..4048)
DNA (795bp) protein (265aa)
Folate-binding protein YgfZ n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DQ56_9EURY
Folate-binding protein YgfZ {ECO:0000313|EMBL:ELZ36832.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense D
folate-binding protein YgfZ
sw_9_scaffold_164_6
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4152..4409)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXW0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK41169.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_9_scaffold_164_7
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4470..5018)
DNA (549bp) protein (183aa)
Archaemetzincin {ECO:0000256|HAMAP-Rule:MF_01842}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_01842};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum
Archaemetzincin n=1 Tax=Halorubrum sp. AJ67 RepID=V6E0S2_9EURY
archaemetzincin-like protein rbh
sw_9_scaffold_164_8
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5031..6476
DNA (1446bp) protein (482aa)
HAD superfamily (Subfamily IA) hydrolase, TIGR01548 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DPQ6_9EURY
HAD superfamily (Subfamily IA) hydrolase, TIGR01548 {ECO:0000313|EMBL:ELZ36828.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
HAD superfamily (subfamily IA) hydrolase, TIGR01548 rbh
sw_9_scaffold_164_9
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6741..7199
DNA (459bp) protein (153aa)
OsmC family protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ERF2_9EURY
OsmC family protein {ECO:0000313|EMBL:ELZ50386.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
redox protein, regulator of disulfide bond formation
sw_9_scaffold_164_trna_2
unknown

Not on your lists

comp(7289..7364)
DNA (76bp)
transferRNA
sw_9_scaffold_164_10
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7409..7873)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXG2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40551.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_9_scaffold_164_trna_1
unknown

Not on your lists

comp(7937..8044)
DNA (108bp)
transferRNA
sw_9_scaffold_164_11
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8210..8941
DNA (732bp) protein (244aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264, ECO:0000313|EMBL:ELZ59130.1};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRN
tRNA CCA-pyrophosphorylase (EC:2.7.7.21)
CCA-adding enzyme n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FGS3_9EURY
sw_9_scaffold_164_12
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9150..9551
DNA (402bp) protein (134aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264, ECO:0000313|EMBL:ELZ36826.1};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRN
tRNA CCA-pyrophosphorylase (EC:2.7.7.21)
CCA-adding enzyme n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DMU3_9EURY
Suspect SCG annotation. See neighboring gene [sw_9_scaffold_164_11].
sw_9_scaffold_164_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9611..9925)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DMW0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36825.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_164_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10022..10384)
DNA (363bp) protein (121aa)
Putative fluoride ion transporter CrcB n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FIP1_9EURY
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum h
Camphor resistance CrcB protein
sw_9_scaffold_164_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10381..10785)
DNA (405bp) protein (135aa)
Putative fluoride ion transporter CrcB n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FIJ0_9EURY
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum h
Camphor resistance CrcB protein
sw_9_scaffold_164_16
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10832..11887)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DQ46_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36822.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein rbh
sw_9_scaffold_164_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11999..12475
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FGS8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ59135.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_164_18
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12556..13374)
DNA (819bp) protein (273aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|RuleBase:RU003802}; EC=2.1.1.77 {ECO:0000256|RuleBase:RU003802};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Ha
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DRP7_9EURY
protein-L-isoaspartate(D-aspartate) O-methyltransferase rbh
sw_9_scaffold_164_19
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13462..14094)
DNA (633bp) protein (211aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
protein-L-isoaspartate O-methyltransferase n=1 Tax=Halorubrum sp. T3 RepID=UPI00035FBFA9
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:ELZ36818.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum t
sw_9_scaffold_164_20
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14198..16198
DNA (2001bp) protein (667aa)
DNA photolyase FAD-binding protein {ECO:0000313|EMBL:CDK41013.1}; EC=4.1.99.3 {ECO:0000313|EMBL:CDK41013.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
DNA photolyase FAD-binding (EC:4.1.99.3)
DNA photolyase FAD-binding protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6E089_9EURY
sw_9_scaffold_164_21
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16219..17535
DNA (1317bp) protein (439aa)
Threonine dehydratase {ECO:0000313|EMBL:ELZ36815.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ELZ36815.1};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
Threonine dehydratase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DMU9_9EURY
threonine dehydratase rbh
sw_9_scaffold_164_22
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17744..18124
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000376F502
Uncharacterized protein {ECO:0000313|EMBL:EMA61689.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
sw_9_scaffold_164_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18213..19688
DNA (1476bp) protein (492aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1227481 species="Archaea; Eu
cysteinyl-tRNA synthetase (EC:6.1.1.16) rbh
Cysteine--tRNA ligase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FGI2_9EURY
sw_9_scaffold_164_24
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19725..20048)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DYG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40575.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_9_scaffold_164_25
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20048..20278)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTJ2_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12182.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_9_scaffold_164_26
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20331..21137)
DNA (807bp) protein (269aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FIP8_9EURY
Prephenate dehydratase {ECO:0000313|EMBL:ELZ59142.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7008
sw_9_scaffold_164_27
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21232..22413)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FIK0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ59143.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein rbh
sw_9_scaffold_164_28
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22416..23285)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FKN7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ59144.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
Displaying items 1-30 of 43 in total

View Taxonomy