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sw_9_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_188_1
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..297
DNA (297bp) protein (99aa)
Adenosinetriphosphatase n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z7R5_9EURY
Adenosinetriphosphatase {ECO:0000313|EMBL:ELY82525.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_9_scaffold_188_2
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(260..1978)
DNA (1719bp) protein (573aa)
ATPase AAA (EC:3.6.4.6)
ATPase AAA n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E4V3_9EURY
ATPase AAA {ECO:0000313|EMBL:EMA57604.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
sw_9_scaffold_188_3
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1975..2094)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DS59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK38380.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_9_scaffold_188_4
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2272..3681
DNA (1410bp) protein (470aa)
UPF0272 protein C472_00150 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E2R4_9EURY
UPF0272 protein C472_00150 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichens
hypothetical protein rbh
sw_9_scaffold_188_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3759..4112)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F217_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54101.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_188_6
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4694..5998
DNA (1305bp) protein (435aa)
Aspartyl-tRNA ligase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E6T7_9EURY
Aspartyl-tRNA ligase {ECO:0000313|EMBL:ELZ42059.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1421
aspartyl-tRNA synthetase
sw_9_scaffold_188_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6275..6577
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F647_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54099.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_188_8
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6579..7307
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E579_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42057.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein rbh
sw_9_scaffold_188_9
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7596..8291)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E2Q9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42056.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_188_10
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8340..8867)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F212_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54096.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_188_11
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8914..9741)
DNA (828bp) protein (276aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1227481 species="Archaea; Euryarchaeota;
ATP-NAD/AcoX kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F2F8_9EURY
sw_9_scaffold_188_12
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9915..11432
DNA (1518bp) protein (506aa)
Circadian clock protein, KaiC n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E4U5_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ42053.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense
circadian clock protein, KaiC rbh
sw_9_scaffold_188_13
unknown

Not on your lists

comp(11386..12045)
DNA (660bp) protein (220aa)

This feature has no annotations

sw_9_scaffold_188_trna_2
unknown

Not on your lists

comp(11778..11848)
DNA (71bp)
transferRNA
sw_9_scaffold_188_14
unknown

Not on your lists

12730..13269
DNA (540bp) protein (180aa)

This feature has no annotations

sw_9_scaffold_188_15
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13262..14302
DNA (1041bp) protein (347aa)
Putative rep protein (DUF1424) id=24618733 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Putative rep protein (DUF1424) {ECO:0000313|EMBL:ERH06340.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
sw_9_scaffold_188_16
unknown

Not on your lists

15093..15338
DNA (246bp) protein (82aa)

This feature has no annotations

sw_9_scaffold_188_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15335..15709
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FAJ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55619.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
sw_9_scaffold_188_18
unknown

Not on your lists

comp(16183..16398)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_9_scaffold_188_19
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16759..17931)
DNA (1173bp) protein (391aa)
Phage integrase family domain-containing protein n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HPC1_9EURY
Phage integrase family domain-containing protein
Phage integrase family domain-containing protein {ECO:0000313|EMBL:ELZ86440.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofer
sw_9_scaffold_188_20
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18165..19598
DNA (1434bp) protein (478aa)
Peptidase M28 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F413_9EURY
Peptidase M28 {ECO:0000313|EMBL:ELZ54093.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
peptidase M28 rbh
sw_9_scaffold_188_21
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19644..20396)
DNA (753bp) protein (251aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1227485 species=
nadE_2; NAD(+) synthase (glutamine-hydrolyzing) 2 (EC:6.3.5.1)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E2Q5_9EURY
sw_9_scaffold_188_22
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20971..21504
DNA (534bp) protein (178aa)
Transcriptional regulator n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F208_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ54091.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7
transcriptional regulator, TrmB
sw_9_scaffold_188_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21506..22423)
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F2F3_9EURY
truA; tRNA pseudouridine synthase A
sw_9_scaffold_188_24
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22420..22938)
DNA (519bp) protein (173aa)
UspA domain protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E4U2_9EURY
UspA domain protein {ECO:0000313|EMBL:ELZ42048.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210
UspA domain protein
sw_9_scaffold_188_25
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23002..23202)
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Halorubrum RepID=M0E572_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42047.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_188_26
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23431..23997
DNA (567bp) protein (189aa)
peptidyl-prolyl cis-trans isomerase cyclophilin type (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase cyclophilin type n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E2P9_9EURY
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:ELZ42046.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
sw_9_scaffold_188_trna_1
unknown

Not on your lists

24112..24220
DNA (109bp)
transferRNA
sw_9_scaffold_188_27
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24350..25543
DNA (1194bp) protein (398aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein (EC:2.5.1.48) rbh
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F205_9EURY
Cys/Met metabolism pyridoxal-phosphate-dependent protein {ECO:0000313|EMBL:ELZ54086.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source
sw_9_scaffold_188_28
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25821..26768
DNA (948bp) protein (316aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E4T8_9EURY
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ELZ42043.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding rbh
Displaying items 1-30 of 37 in total

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