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sw_9_scaffold_194

Search features with annotation key words

Displaying items 1-30 of 64 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_194_1
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(50..1306)
DNA (1257bp) protein (419aa)
Transposase n=2 Tax=Halorubrum distributum RepID=M0ECQ1_9EURY
transposase
Transposase {ECO:0000313|EMBL:ELZ53966.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 10118.;"
sw_9_scaffold_194_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1489..1923)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DH13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34765.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
glycine-rich protein
sw_9_scaffold_194_3
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2023..3000)
DNA (978bp) protein (326aa)
Aldo/keto reductase {ECO:0000313|EMBL:CDK40835.1}; EC=1.1.1.317 {ECO:0000313|EMBL:CDK40835.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;
Aldo/keto reductase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DZP8_9EURY
aldo/keto reductase
sw_9_scaffold_194_4
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3077..3274)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P9B9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66626.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_9_scaffold_194_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3374..5110
DNA (1737bp) protein (579aa)
Cryptochrome/photolyase-related protein Phr3 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F7A9_9EURY
Cryptochrome/photolyase-related protein Phr3 {ECO:0000313|EMBL:ELZ55107.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
phr3; cryptochrome/photolyase-related protein Phr3
sw_9_scaffold_194_6
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5162..5407)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJ63_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34762.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_194_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5471..5650)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F935_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55109.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_194_8
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5747..6037
DNA (291bp) protein (97aa)
Translation initiation factor 1A n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DH09_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
translation initiation factor IF-1A
sw_9_scaffold_194_9
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6349..7242
DNA (894bp) protein (298aa)
RimK domain protein ATP-grasp n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F520_9EURY
RimK domain protein ATP-grasp {ECO:0000313|EMBL:ELZ55111.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium AT
RimK domain protein ATP-grasp rbh
sw_9_scaffold_194_10
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7271..7651)
DNA (381bp) protein (127aa)
HSP20 type chaperone n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWV1_9EURY
HSP20 type chaperone {ECO:0000313|EMBL:CDK40842.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
HSP20 type chaperone
sw_9_scaffold_194_11
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7858..8910
DNA (1053bp) protein (351aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU003388, ECO:0000313|EMBL:ELZ35042.1}; EC=1.2.1.59 {ECO:0000256|RuleBase:RU003388};; TaxID=1227485 species="Archaea; Euryarchaeota; Halo
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12) rbh
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DK28_9EURY
sw_9_scaffold_194_12
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9000..9887
DNA (888bp) protein (296aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1173487 species="Archaea;
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWY6_9EURY
sw_9_scaffold_194_13
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9884..10138
DNA (255bp) protein (85aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1173487 species="Archaea;
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWY6_9EURY
sw_9_scaffold_194_14
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10156..10614)
DNA (459bp) protein (153aa)
AsnC family transcriptional regulator n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DLP2_9EURY
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELZ35049.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenq
AsnC family transcriptional regulator
sw_9_scaffold_194_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10741..12111
DNA (1371bp) protein (457aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F525_9EURY
sw_9_scaffold_194_16
unknown

Not on your lists

12300..12422
DNA (123bp) protein (41aa)

This feature has no annotations

sw_9_scaffold_194_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13422..14735)
DNA (1314bp) protein (438aa)
Ribonuclease BN n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F723_9EURY
Ribonuclease BN {ECO:0000313|EMBL:ELZ55118.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
ribonuclease BN
sw_9_scaffold_194_18
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14844..15974)
DNA (1131bp) protein (377aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32) rbh
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F944_9EURY
sw_9_scaffold_194_19
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16169..16849
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Halorubrum distributum RepID=M0EQC6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ49298.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
hypothetical protein
sw_9_scaffold_194_20
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16869..18266
DNA (1398bp) protein (466aa)
Amino acid transport protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NJE4_9EURY
Amino acid transport protein {ECO:0000313|EMBL:EMA58082.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM
cat5; transport protein (probable substrate cationic amino acids)
sw_9_scaffold_194_21
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18302..19009)
DNA (708bp) protein (236aa)
UspA domain protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PIU7_9EURY
UspA domain protein {ECO:0000313|EMBL:EMA69962.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
UspA domain protein
sw_9_scaffold_194_22
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19173..20657)
DNA (1485bp) protein (495aa)
Preprotein translocase, SecY subunit n=1 Tax=Halorubrum sp. AJ67 RepID=V6DY93_9EURY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=117348
preprotein translocase subunit SecY
sw_9_scaffold_194_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(20659..21156)
DNA (498bp) protein (166aa)
50S ribosomal protein L15P n=2 Tax=Halorubrum RepID=M0DKV8_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium AT
rpl15p; 50S ribosomal protein L15P
sw_9_scaffold_194_24
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(21153..21617)
DNA (465bp) protein (155aa)
50S ribosomal protein L30P n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F727_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" s
rpl30p; 50S ribosomal protein L30P
sw_9_scaffold_194_25
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(21617..22264)
DNA (648bp) protein (216aa)
30S ribosomal protein S5P n=2 Tax=Halorubrum RepID=M0DIQ6_9EURY
30S ribosomal protein S5P {ECO:0000313|EMBL:ELZ35350.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM
rps5p; 30S ribosomal protein S5P rbh
sw_9_scaffold_194_26
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(22257..22814)
DNA (558bp) protein (186aa)
50S ribosomal protein L18P n=2 Tax=Halorubrum RepID=M0DMG6_9EURY
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" so
rpl18p; 50S ribosomal protein L18P rbh
sw_9_scaffold_194_27
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22814..23275)
DNA (462bp) protein (154aa)
50S ribosomal protein L19e n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F533_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium A
rpl19e; 50S ribosomal protein L19e
sw_9_scaffold_194_28
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23268..23978)
DNA (711bp) protein (237aa)
50S ribosomal protein L32e n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DKV1_9EURY
50S ribosomal protein L32e {ECO:0000313|EMBL:ELZ35347.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DS
50S ribosomal protein L32e
sw_9_scaffold_194_29
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(23982..24515)
DNA (534bp) protein (178aa)
Archaeal ribosomal protein L6P n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWW6_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
rpl6p; 50S ribosomal protein L6P
sw_9_scaffold_194_30
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(24518..24910)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=4 Tax=Halorubrum RepID=RS8_HALLT
rps8p; 30S ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum D
Displaying items 1-30 of 64 in total

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