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sw_9_scaffold_237

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_237_1
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..248)
DNA (246bp) protein (82aa)
Rpo operon protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FJ45_9EURY
Rpo operon protein {ECO:0000313|EMBL:ELZ59312.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;
rpo operon protein
sw_9_scaffold_237_2
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(264..398)
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
DNA-directed RNA polymerase subunit P n=10 Tax=Halorubrum RepID=RPOP_HALLT
DNA-directed RNA polymerase subunit P
sw_9_scaffold_237_3
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(403..669)
DNA (267bp) protein (89aa)
50S ribosomal protein L37Ae n=1 Tax=Halorubrum sp. AJ67 RepID=V6DX63_9EURY
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
ribosomal L37ae protein
sw_9_scaffold_237_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

938..2386
DNA (1449bp) protein (483aa)
receiver/sensor box histidine kinase (EC:2.7.13.3)
PAS domain S-box n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FH88_9EURY
PAS domain S-box {ECO:0000313|EMBL:ELZ59315.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
sw_9_scaffold_237_5
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2602..3537
DNA (936bp) protein (312aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00304}; TaxI
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DKD9_9EURY
putative thiazole biosynthetic enzyme / probable ribose-1,5-bisphosphate isomerase
sw_9_scaffold_237_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3993..5750
DNA (1758bp) protein (586aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:ELZ59317.1}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:ELZ59317.1};; TaxID=1227481 species="Archaea; Euryarchaeota;
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FJ51_9EURY
sw_9_scaffold_237_7
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5824..6030
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E9F0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44436.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_9_scaffold_237_8
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6118..6810
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6E0I8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK41103.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein rbh
sw_9_scaffold_237_9
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6807..7058
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0D9B3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32046.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_237_10
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7083..7700
DNA (618bp) protein (206aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL
Probable deoxycytidine triphosphate deaminase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EBM9_9EURY
dcd; deoxycytidine triphosphate deaminase
sw_9_scaffold_237_11
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7697..8605
DNA (909bp) protein (303aa)
thiamine-phosphate synthase n=1 Tax=Halorubrum sp. T3 RepID=UPI0003772B03
DNA binding protein {ECO:0000313|EMBL:ELZ53602.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 10118.;"
DNA binding protein
sw_9_scaffold_237_12
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9025..11190
DNA (2166bp) protein (722aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000313|EMBL:ELZ47988.1};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; Tax
Methionine--tRNA ligase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0ELN9_9EURY
metG; methionyl-tRNA synthetase
sw_9_scaffold_237_13
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11261..11467
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FL58_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ59324.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_237_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11505..11924)
DNA (420bp) protein (140aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FH98_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ELZ59325.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
glyoxalase/bleomycin resistance protein/dioxygenase
sw_9_scaffold_237_15
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11964..12089)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EJS8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ47990.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
sw_9_scaffold_237_16
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12184..12861
DNA (678bp) protein (226aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:ELZ59326.1}; EC=1.1.1.193 {ECO:0000313|EMBL:ELZ59326.1};; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193)
5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FH03_9EURY
sw_9_scaffold_237_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13113..14036
DNA (924bp) protein (308aa)
phosphoserine phosphatase n=1 Tax=Halorubrum sp. T3 RepID=UPI000364727B
Phosphoserine phosphatase {ECO:0000313|EMBL:ELZ59327.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7
hypothetical protein rbh
sw_9_scaffold_237_18
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14159..15094
DNA (936bp) protein (312aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DBA5_9EURY
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:ELZ32053.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebe
signal peptide peptidase SppA, 36K type rbh
sw_9_scaffold_237_19
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15173..16309
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DX40_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40932.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_9_scaffold_237_20
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16392..17216
DNA (825bp) protein (275aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000313|EMBL:ELZ32055.1};; TaxID=12
Shikimate dehydrogenase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0D9A2_9EURY
shikimate 5-dehydrogenase
Displaying 20 items

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