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sw_9_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_242_1
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..217)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DQ31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37601.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_242_2
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(286..1332)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FDJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ58071.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_242_3
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1530..1844
DNA (315bp) protein (105aa)
Ferredoxin n=5 Tax=Halorubrum RepID=M0D7H1_9EURY
Ferredoxin {ECO:0000313|EMBL:EMA60766.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
ferredoxin
sw_9_scaffold_242_4
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2053..2247)
DNA (195bp) protein (65aa)
Cold-shock DNA-binding domain protein n=10 Tax=Halorubrum RepID=M0D727_9EURY
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ELZ37604.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenq
cold-shock DNA-binding domain protein
sw_9_scaffold_242_5
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2433..3023
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DQ70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37605.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_242_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3070..4062)
DNA (993bp) protein (331aa)
Phosphotransferase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FFR7_9EURY
Phosphotransferase {ECO:0000313|EMBL:ELZ58067.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;
phosphotransferase
sw_9_scaffold_242_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4059..4424)
DNA (366bp) protein (122aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FDI9_9EURY
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:ELZ58066.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochste
haloacid dehalogenase-like hydrolase
sw_9_scaffold_242_8
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4750..4920
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FDR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ58065.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_242_9
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5013..5306
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DU05_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37609.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_242_trna_5
unknown

Not on your lists

comp(5777..5850)
DNA (74bp)
transferRNA
sw_9_scaffold_242_10
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6176..7351
DNA (1176bp) protein (392aa)
DNA-cytosine methyltransferase (EC:2.1.1.37)
DNA-cytosine methyltransferase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXB8_9EURY
DNA-cytosine methyltransferase {ECO:0000313|EMBL:ELZ37611.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichens
sw_9_scaffold_242_trna_4
unknown

Not on your lists

comp(7910..7980)
DNA (71bp)
transferRNA
sw_9_scaffold_242_11
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8030..10084)
DNA (2055bp) protein (685aa)
DEAD/DEAH box helicase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DSF8_9EURY
DEAD/DEAH box helicase {ECO:0000313|EMBL:ELZ37612.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14
DEAD/DEAH box helicase rbh
sw_9_scaffold_242_12
unknown

Not on your lists

10535..10660
DNA (126bp) protein (42aa)

This feature has no annotations

sw_9_scaffold_242_13
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10770..11300)
DNA (531bp) protein (177aa)
Endonuclease NucS n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXJ5_9EURY
Endonuclease NucS {ECO:0000313|EMBL:CDK41077.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_9_scaffold_242_14
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11634..12047
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XT28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY64516.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_9_scaffold_242_15
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12102..13391)
DNA (1290bp) protein (430aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1) rbh
Adenosylhomocysteinase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DQ45_9EURY
sw_9_scaffold_242_16
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13388..14212)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DSG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37617.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_242_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14859..16178)
DNA (1320bp) protein (440aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FHJ6_9EURY
amidohydrolase
sw_9_scaffold_242_18
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16319..17503
DNA (1185bp) protein (395aa)
Water stress and Hypersensitive response domain protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0D573_9EURY
Water stress and Hypersensitive response domain protein {ECO:0000313|EMBL:ELZ30641.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source=
Water stress and Hypersensitive response domain protein rbh
sw_9_scaffold_242_19
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17641..18024
DNA (384bp) protein (128aa)
Dihydroneopterin aldolase {ECO:0000256|HAMAP-Rule:MF_02130}; Short=DHNA {ECO:0000256|HAMAP-Rule:MF_02130};; EC=4.1.2.25 {ECO:0000256|HAMAP-Rule:MF_02130};; 7,8-dihydroneopterin aldolase {ECO:0000256|H
Dihydroneopterin aldolase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DU14_9EURY
hypothetical protein
sw_9_scaffold_242_20
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18078..18575
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FFQ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ58052.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_242_21
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18660..20018)
DNA (1359bp) protein (453aa)
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:CDK39999.1}; EC=3.6.3.24 {ECO:0000313|EMBL:CDK39999.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DUV2_9EURY
oligopeptide/dipeptide ABC transporter ATPase
sw_9_scaffold_242_22
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20015..21136)
DNA (1122bp) protein (374aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DSG7_9EURY
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:ELZ37622.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
oligopeptide/dipeptide ABC transporter ATPase
sw_9_scaffold_242_23
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21138..22118)
DNA (981bp) protein (327aa)
ABC-type transport system permease n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EXI2_9EURY
ABC-type transport system permease {ECO:0000313|EMBL:ELZ51783.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
ABC-type transport system permease
sw_9_scaffold_242_24
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22118..23116)
DNA (999bp) protein (333aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EZE6_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ELZ51784.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubr
binding-protein-dependent transport systems inner membrane component
sw_9_scaffold_242_25
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23272..24876)
DNA (1605bp) protein (535aa)
Family 5 extracellular solute-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EVN9_9EURY
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:ELZ51785.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
family 5 extracellular solute-binding protein
sw_9_scaffold_242_26
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25087..26742)
DNA (1656bp) protein (552aa)
Protein synthesis factor GTP-binding n=1 Tax=Halorubrum sp. AJ67 RepID=V6DX99_9EURY
Protein synthesis factor GTP-binding {ECO:0000313|EMBL:CDK39995.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ6
protein synthesis factor GTP-binding
sw_9_scaffold_242_27
unknown

Not on your lists

comp(26768..27121)
DNA (354bp) protein (118aa)

This feature has no annotations

sw_9_scaffold_242_28
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27178..28083)
DNA (906bp) protein (302aa)
Transcription initiation factor IIB n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DS16_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
transcription factor TFIIB cyclin-related
Displaying items 1-30 of 62 in total

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