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sw_9_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_260_1
Thermotoga neapolitana, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(3..755)
DNA (753bp) protein (251aa)
ATPase n=1 Tax=Ahrensia kielensis RepID=UPI000378326B
Inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACM22415.1}; TaxID=309803 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga neapolitana (strain ATCC 49049 /
sw_9_scaffold_260_2
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1387..2616)
DNA (1230bp) protein (410aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1F3_HALTV
Gluconate dehydratase {ECO:0000313|EMBL:KDE60555.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
D-gluconate dehydratase
sw_9_scaffold_260_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2814..3605
DNA (792bp) protein (264aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39) rbh
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXN1_9EURY
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:ELZ27970.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum p
sw_9_scaffold_260_4
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3840..5330)
DNA (1491bp) protein (497aa)
Methylmalonic acid semialdehyde dehydrogenase n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PD45_9EURY
Methylmalonic acid semialdehyde dehydrogenase {ECO:0000313|EMBL:ERG91497.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloqu
methylmalonate-semialdehyde dehydrogenase
sw_9_scaffold_260_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5459..6244
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXP3_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27980.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeomet
short-chain dehydrogenase/reductase SDR
sw_9_scaffold_260_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6214..6555)
DNA (342bp) protein (114aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZT6_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ELZ28133.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
major facilitator superfamily MFS_1
sw_9_scaffold_260_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7019..7180)
DNA (162bp) protein (54aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZT6_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ELZ28133.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
sw_9_scaffold_260_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7624..8388)
DNA (765bp) protein (255aa)
IclR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXP7_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ27985.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
IclR family transcriptional regulator
sw_9_scaffold_260_9
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9061..9306)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000361AAA8
Uncharacterized protein {ECO:0000313|EMBL:KIZ16592.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.
mmyY; hypothetical protein
sw_9_scaffold_260_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9728..10108)
DNA (381bp) protein (127aa)
IS630 family transposase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JPR5_HALVA
IS630 family transposase {ECO:0000313|EMBL:EMA09964.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATC
IS630 family transposase
sw_9_scaffold_260_11
unknown

Not on your lists

11008..11268
DNA (261bp) protein (87aa)

This feature has no annotations

sw_9_scaffold_260_12
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11220..11390)
DNA (171bp) protein (57aa)
Formate/nitrite transporter n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NMU8_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA57975.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 135
formate/nitrite transporter family protein
sw_9_scaffold_260_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11347..12231)
DNA (885bp) protein (295aa)
Formate/nitrite transporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBQ8_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA54105.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensi
transporter
sw_9_scaffold_260_14
unknown

Not on your lists

comp(12218..12433)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_9_scaffold_260_15
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12452..13126)
DNA (675bp) protein (225aa)
IS240-type transposase (ISH102) n=1 Tax=Halorubrum sp. AJ67 RepID=V6E035_9EURY
IS240-type transposase (ISH102) {ECO:0000313|EMBL:CDK39675.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
IS240-type transposase (ISH102)
sw_9_scaffold_260_16
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13283..14671
DNA (1389bp) protein (463aa)
FAD dependent oxidoreductase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FD00_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELZ57213.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATC
FAD dependent oxidoreductase rbh
sw_9_scaffold_260_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14718..15524)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FD92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ57212.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_260_18
unknown

Not on your lists

comp(16016..16564)
DNA (549bp) protein (183aa)

This feature has no annotations

sw_9_scaffold_260_trna_1
unknown

Not on your lists

16031..16105
DNA (75bp)
transferRNA
sw_9_scaffold_260_19
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16823..17536
DNA (714bp) protein (238aa)
Kinase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E1I1_9EURY
Kinase {ECO:0000313|EMBL:ELZ40199.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
kinase
sw_9_scaffold_260_20
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17624..17908
DNA (285bp) protein (95aa)
Translation initiation factor 1A n=5 Tax=Halorubrum RepID=M0DC51_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
translation initiation factor aIF-1A
sw_9_scaffold_260_21
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18088..19200
DNA (1113bp) protein (371aa)
Aminotransferase class V n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FF09_9EURY
Aminotransferase class V {ECO:0000313|EMBL:ELZ57209.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 70
aminotransferase class V
sw_9_scaffold_260_22
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19289..19849
DNA (561bp) protein (187aa)
Methyltransferase type 11 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DZS1_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:ELZ40202.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM
methyltransferase type 11
sw_9_scaffold_260_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19943..21043
DNA (1101bp) protein (367aa)
DoxX family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FD88_9EURY
DoxX family protein {ECO:0000313|EMBL:ELZ57207.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.
DoxX family protein
sw_9_scaffold_260_24
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21146..22432
DNA (1287bp) protein (429aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000313|EMBL:ELZ40204.1};; Phos
phosphoglucose isomerase (PGI) (EC:5.3.1.9) rbh
Probable glucose-6-phosphate isomerase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E1I7_9EURY
sw_9_scaffold_260_25
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22885..23199
DNA (315bp) protein (105aa)
Putative signal peptide protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DYH7_9EURY
Putative signal peptide protein {ECO:0000313|EMBL:CDK40423.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_9_scaffold_260_26
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23229..24521)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXH8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40206.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein rbh
sw_9_scaffold_260_27
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24792..25217)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FD83_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ57202.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_260_28
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25218..25739)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E1J2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40209.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_260_29
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25928..27394)
DNA (1467bp) protein (489aa)
Na+/H+ antiporter NhaC n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EQ59_9EURY
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:ELZ49233.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
Na+/H+ antiporter NhaC rbh
Displaying items 1-30 of 49 in total

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