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sw_9_scaffold_1001

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_1001_1
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..247
DNA (246bp) protein (82aa)
30S ribosomal protein S13 n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W6U0_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense
30S ribosomal protein S13
sw_9_scaffold_1001_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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234..758
DNA (525bp) protein (175aa)
rps4p; 30S ribosomal protein S4P; K02986 small subunit ribosomal protein S4 id=24648739 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J
rps4p; 30S ribosomal protein S4P
sw_9_scaffold_1001_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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910..1134
DNA (225bp) protein (75aa)
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps11p; 30S ribosomal protein S11P
sw_9_scaffold_1001_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1137..1925
DNA (789bp) protein (263aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ09_HALMD
RNA polymerase insert
sw_9_scaffold_1001_trna_1
unknown

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2055..2139
DNA (85bp)
transferRNA
sw_9_scaffold_1001_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2158..2403
DNA (246bp) protein (82aa)
50S ribosomal protein L18e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQT5_NATPD
rpl18R; 50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_9_scaffold_1001_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2400..2840
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT4_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rpl13p; 50S ribosomal protein L13
sw_9_scaffold_1001_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2834..3235
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ12_HALMD
rps9p; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.
sw_9_scaffold_1001_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3240..3440
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6) id=24648746 bin=uncultivated_archaeon_J07ABHX6 species=Salinarchaeum sp. Harcht-Bsk1 genus=Salinarchaeum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit N
sw_9_scaffold_1001_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3443..3622
DNA (180bp) protein (60aa)
RNA polymerase Rpb6; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=24655919 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;"
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
sw_9_scaffold_1001_10
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3746..4735
DNA (990bp) protein (330aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FBX7_9EURY
sw_9_scaffold_1001_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4732..5544
DNA (813bp) protein (271aa)
30S ribosomal protein S2 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KLV7_9EURY
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
30S ribosomal protein S2
sw_9_scaffold_1001_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5628..6008
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25588.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_1001_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6094..7281)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W1D9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02411.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_9_scaffold_1001_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7585..8664)
DNA (1080bp) protein (360aa)
peptidase S1 and S6 chymotrypsin/Hap id=24646926 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Serine proteinase {ECO:0000313|EMBL:ERH11091.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
htrA1; serine protease HtrA
sw_9_scaffold_1001_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8965..9783
DNA (819bp) protein (273aa)
menB; naphthoate synthase (EC:4.1.3.36); K01661 naphthoate synthase [EC:4.1.3.36] id=24644064 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1085028 spec
naphthoate synthase
Displaying 16 items

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