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sw_9_scaffold_3115

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_3115_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..937)
DNA (936bp) protein (312aa)
leuA2; (R)-citramalate synthase (EC:2.3.1.182); K09011 D-citramalate synthase [EC:2.3.1.182] id=24648493 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:ERH09624.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
(R)-citramalate synthase
sw_9_scaffold_3115_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1046..1330)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10224.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_3115_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1571..2857
DNA (1287bp) protein (429aa)
major facilitator superfamily protein id=24646010 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Sugar phosphate permease {ECO:0000313|EMBL:ERH10226.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
D-lactate dehydrogenase
sw_9_scaffold_3115_4
Leporid herpesvirus 4, Simplexvirus, Herpesvirales, Viruses

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comp(3387..4463)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Leporid herpesvirus 4 RepID=J9QWN8_9ALPH
Uncharacterized protein {ECO:0000313|EMBL:AFR32514.1}; TaxID=481315 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus.;" source="Leporid her
PE-PGRS family protein
sw_9_scaffold_3115_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4490..4981)
DNA (492bp) protein (164aa)
hypothetical protein id=24649218 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10307.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_3115_6
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5179..6918)
DNA (1740bp) protein (580aa)
DNA polymerase IV n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JUP1_9EURY
polX; DNA polymerase IV
DNA polymerase IV {ECO:0000313|EMBL:EMA11684.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.
sw_9_scaffold_3115_7
unknown

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7579..8118
DNA (540bp) protein (180aa)

This feature has no annotations

sw_9_scaffold_3115_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8778..9329
DNA (552bp) protein (184aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRV7_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERH09918.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
transcriptional regulator, TrmB
sw_9_scaffold_3115_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9451..10134
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:ELZ27303.1}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_0
nthA; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXD3_9EURY
sw_9_scaffold_3115_10
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10226..10852
DNA (627bp) protein (209aa)
UspA domain protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PA36_9EURY
UspA domain protein {ECO:0000313|EMBL:EMA66718.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
UspA domain protein
sw_9_scaffold_3115_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10909..11580)
DNA (672bp) protein (224aa)
amino acid transport protein id=24654047 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Amino acid transporter {ECO:0000313|EMBL:ERG88379.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
cat5; transport protein (probable substrate cationic amino acids)
sw_9_scaffold_3115_12
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11556..12167)
DNA (612bp) protein (204aa)
Amino acid transport protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NRI1_9EURY
Amino acid transport protein {ECO:0000313|EMBL:ELZ31829.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 1
amino acid transporter
sw_9_scaffold_3115_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12592..12963
DNA (372bp) protein (124aa)
Fe-S oxidoreductase n=1 Tax=Halomicrobium katesii RepID=UPI00037F57F9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47062.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
Displaying 13 items

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