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sw_9_scaffold_860

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_860_1
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(317..1333)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CJR2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22124.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_9_scaffold_860_2
unknown

Not on your lists

comp(1333..1503)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_9_scaffold_860_3
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1651..2610
DNA (960bp) protein (320aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T700_THEIA
ABC transporter permease {ECO:0000313|EMBL:KHO60967.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoan
binding-protein-dependent transporters inner membrane component
sw_9_scaffold_860_4
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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2612..3478
DNA (867bp) protein (289aa)
ABC-type sugar transport system, permease component n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBM5_HALHC
ABC-type sugar transport system, permease component
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AGB41488.1}; Flags: Precursor;; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halob
sw_9_scaffold_860_5

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comp(3539..4474)
DNA (936bp) protein (312aa)
Lactate dehydrogenase related dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XFV0_9ARCH
Lactate dehydrogenase related dehydrogenase {ECO:0000313|EMBL:ESS06999.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
phosphoglycerate dehydrogenase-like oxidoreductase
sw_9_scaffold_860_6
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4577..5836)
DNA (1260bp) protein (420aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PMT7_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA70050.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
mandelate racemase/muconate lactonizing protein
sw_9_scaffold_860_7
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5993..8350
DNA (2358bp) protein (786aa)
alpha-glucosidase (EC:3.2.1.-)
Alpha-glucosidase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PJ16_9EURY
Alpha-glucosidase {ECO:0000313|EMBL:EMA69933.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
sw_9_scaffold_860_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8564..9490
DNA (927bp) protein (309aa)
ABC transporter related protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDQ5_9EURY
ABC transporter related protein {ECO:0000313|EMBL:EJN57694.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
sw_9_scaffold_860_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9501..9689
DNA (189bp) protein (63aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI1_HALBP
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADQ68865.1}; Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY28707.1}; TaxID=469382 species="Archaea; Eur
sw_9_scaffold_860_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9794..10516
DNA (723bp) protein (241aa)
Protein GrpE n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR18_9EURY
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
molecular chaperone GrpE
sw_9_scaffold_860_11
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10555..12525
DNA (1971bp) protein (657aa)
Chaperone protein DnaK n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLM7_HALAR
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK1; chaperone protein DnaK
sw_9_scaffold_860_12
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12540..12911
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CS72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26051.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_9_scaffold_860_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13037..14074
DNA (1038bp) protein (346aa)
Cobalamin-independent synthase MetE domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZK6_HALMD
Cobalamin-independent synthase MetE domain-containing protein
Cobalamin-independent synthase MetE domain protein {ECO:0000313|EMBL:ACV48774.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
sw_9_scaffold_860_14
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14071..15132
DNA (1062bp) protein (354aa)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase {ECO:0000313|EMBL:AEH38670.1}; EC=2.1.1.14 {ECO:0000313|EMBL:AEH38670.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobac
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4D0_HALXS
sw_9_scaffold_860_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15356..16081)
DNA (726bp) protein (242aa)
RNA-associated protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLK5_9EURY
RNA-associated protein {ECO:0000313|EMBL:ELZ24126.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
RNA-associated protein
sw_9_scaffold_860_16
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16174..16884)
DNA (711bp) protein (237aa)
psmA4; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KSR7_HALAR
sw_9_scaffold_860_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16887..17366)
DNA (480bp) protein (160aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
Ribonuclease P protein component 2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQH0_9EURY
ribonuclease P
Displaying 17 items

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